KEGG   Candidatus Nitrosocosmicus oleophilus: NMY3_02326
Entry
NMY3_02326        CDS       T04185                                 
Name
(GenBank) DNA-directed RNA polymerase subunit K
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
taa  Candidatus Nitrosocosmicus oleophilus
Pathway
taa03020  RNA polymerase
taa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:taa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NMY3_02326
  09124 Replication and repair
   03420 Nucleotide excision repair
    NMY3_02326
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:taa03021]
    NMY3_02326
   03400 DNA repair and recombination proteins [BR:taa03400]
    NMY3_02326
Transcription machinery [BR:taa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     NMY3_02326
  RNA polymerase III system
   RNA polymerase III
     NMY3_02326
  RNA polymerase I system
   RNA polymerase I
     NMY3_02326
DNA repair and recombination proteins [BR:taa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      NMY3_02326
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: ALI36523
UniProt: A0A654M1R0
LinkDB
Position
complement(2107494..2107946)
AA seq 150 aa
MAVKRAKKKSSAVKDDDLDTDKIGDVGKDNLQSEDSDSKLGEVGKKESSVVIVYKTYDAD
VEFKLKEIPSKNNEILIGPVRLTRFEKARITGARSLQLSLGAPILTKIPPEFTDTIMIAK
YELEKKTLPISIRRILPNGLYQDIPIEWTI
NT seq 453 nt   +upstreamnt  +downstreamnt
gtggctgttaagcgagcaaaaaagaagtcaagcgcagtgaaggatgatgatttagacacg
gataagattggcgacgttggaaaagataacttgcaatcggaagattcagatagtaagtta
ggtgaggtggggaaaaaagaatcaagtgtggttatagtttataaaacctatgatgctgat
gtagaatttaagcttaaggaaattccatctaagaataatgaaatccttatcggtcctgtc
cgattaactagatttgaaaaagctaggataacaggtgcccgttcattgcaattgtcattg
ggggcacccattctaacaaagatcccgccagaatttacagataccattatgatagctaaa
tatgaactggaaaagaaaactttgccaatttctataaggagaatacttcccaatgggcta
taccaagatattcctatagaatggaccatttag

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