Candidatus Nitrosocosmicus oleophilus: NMY3_02993
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Entry
NMY3_02993 CDS
T04185
Name
(GenBank) tRNA-splicing endonuclease subunit alpha
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
taa
Candidatus Nitrosocosmicus oleophilus
Brite
KEGG Orthology (KO) [BR:
taa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
taa03016
]
NMY3_02993
Enzymes [BR:
taa01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
NMY3_02993
Transfer RNA biogenesis [BR:
taa03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
NMY3_02993
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
HbpS-like
Motif
Other DBs
NCBI-ProteinID:
ALI37180
UniProt:
A0A654M2F1
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All DBs
Position
2745041..2745733
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AA seq
230 aa
AA seq
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MSSGNNSHNDPTESSQTGEPTDLDLSSFPTENSNDMKTSNEENIDSNFMIEAVHHAKEGK
IVVPEAKQQDQLRNKGFGEIFNKEYVLNSLESLYLLQNNKIKIYRSKIEYDFSTFLKTLI
KKDKKILTKYLIFRDLRSKGYVIKDGFGFGTDFRIYERGEYNKKTSKYISIGLNEGTNIK
ASEFADAIEQVENMGKSVVIAVVERRGEVIYYKTSKMTFFDNKKSKKLVT
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaggaaataattctcacaatgaccctaccgaatcctctcaaaccggtgaaccc
acagatctagatttgtcatcatttcctacagaaaattccaatgatatgaaaactagtaac
gaagagaatattgattcgaatttcatgatagaggcagttcaccatgcgaaggaaggaaaa
atagttgttcctgaggcaaaacagcaagatcaattacggaacaaggggtttggagagatt
tttaataaagaatacgttttaaacagtcttgaaagcttatatttacttcaaaataataaa
attaagatttacagaagcaaaatagaatatgatttttctacatttttgaagacattgatc
aaaaaagacaaaaagatcttgacaaaatatctgatttttagggatttgagaagcaaaggg
tatgtaatcaaagacggctttggattcggaacagattttagaatctacgaaagaggagaa
tacaataagaaaacatcaaaatacatatctattggattaaatgagggaaccaacatcaaa
gcgtcggaatttgccgatgctattgaacaggttgaaaatatgggcaagtctgttgttata
gcggttgtagagcggcgaggtgaagtaatatattacaagacttcaaagatgacttttttt
gacaacaagaaatcaaagaaattggtcacctaa
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