Candidatus Nitrosocosmicus oleophilus: NMY3_03516
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Entry
NMY3_03516 CDS
T04185
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
taa
Candidatus Nitrosocosmicus oleophilus
Brite
KEGG Orthology (KO) [BR:
taa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
taa03016
]
NMY3_03516
Enzymes [BR:
taa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
NMY3_03516
Transfer RNA biogenesis [BR:
taa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NMY3_03516
Prokaryotic type
NMY3_03516
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ALI37698
UniProt:
A0A654M1S6
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All DBs
Position
3241470..3242765
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AA seq
431 aa
AA seq
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MNDRLMKISSPDIDKLAGIEYYTTEFEGIGGTIKKNTEDFHVQEIINDIFLSQISPEQTA
SNIFPVYEIRKKGIDSSHAILTLRKKTGLDLKIVGIKDAKATTIQYASSSTRKVIKNIDL
GKIKLTLVGYSRKPIEKNNLVGNTFEIRIVEPKRDKLDNISQFLYDINNLGNYYGLQRFG
SERLVTHLVGKAILERKFDKATEILMTCTTKYDSKFSREIREKLRDIKSNPNLLHEIPPG
MDIEKNLAQAILRGKDPISALRTIPINIRRLFVQAFQAYLFNKTLSVAIRDDFSLNIPEE
NDLCFDVYDDSLIFGKIRKYEKEKPTDSRIHRLPIIRLPGYSFQPGKNRFDKILKEFMKS
ENMTAKDFFIKEMQELSESGGFRQACFVCKNFKHKKEENSLLVGFSVPKGSYATILLREL
IKPANPIESGF
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatcgtttaatgaagatatcatcaccagatattgataaactcgcgggaattgaa
tattacacaacagagtttgaaggaataggtggaactataaaaaaaaatactgaggacttt
catgtacaagagataataaatgacattttcttaagccagatctctcctgagcagactgca
agcaatattttcccagtttatgaaattagaaaaaagggaatagattcaagtcatgcgatt
ctgactttgaggaaaaaaacgggccttgatctcaaaatagtgggcataaaagatgcaaag
gcgactacaattcaatatgctagcagcagcacaagaaaggtcataaaaaatatcgatctt
ggaaaaataaaattgacactggttggctactcaagaaaaccaatagaaaagaacaatttg
gtaggaaatacgtttgaaataagaattgttgaaccaaaaagagacaaactagataacatt
tcacaatttttgtatgatattaataacttgggcaactattatggattacaaagatttgga
agtgaacggttggtgactcatctagttggaaaagccatccttgagagaaaatttgacaag
gcaaccgagatcttaatgacttgtaccacaaaatatgactcaaaatttagtcgtgaaatt
agggaaaaactgagagacatcaaaagtaatccaaatttgctacacgaaatccctcctgga
atggatatagagaagaatttggcccaagcaatattgaggggaaaagatcctatctcggcc
ttgagaactatccctattaatatcagaagactatttgtccaagcgtttcaggcatatctt
ttcaataagactttaagtgttgctattagggacgacttttcccttaacatacctgaagaa
aatgatctctgttttgacgtttatgatgatagcttgatctttggaaaaattcgcaaatat
gagaaggaaaaacctactgatagtagaatacatagattaccgattattagattaccagga
tattctttccaacctggtaaaaatagatttgacaagatactaaaggaattcatgaaaagt
gaaaacatgaccgccaaagatttttttatcaaggagatgcaggaattaagtgagtcgggc
ggtttcaggcaagcttgttttgtatgcaaaaacttcaaacataaaaaagaagagaactca
ctgttagttgggttctcagtaccaaaaggatcttacgcaactattttattaagagagcta
atcaaacccgctaatcctattgagtcaggtttttag
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