Candidatus Nitrosocosmicus oleophilus: NMY3_03744
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Entry
NMY3_03744 CDS
T04185
Name
(GenBank) transcription initiation factor E subunit alpha
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
taa
Candidatus Nitrosocosmicus oleophilus
Pathway
taa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
taa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NMY3_03744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taa03021
]
NMY3_03744
Transcription machinery [BR:
taa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
NMY3_03744
Prokaryotic type
Archaeal type
TFE
NMY3_03744
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
TFIIE_alpha
D5_N
Arc_PepC
Imm33-like
Rad50_zn_hook
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
ALI37925
UniProt:
A0A654M364
LinkDB
All DBs
Position
complement(3415453..3415968)
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AA seq
171 aa
AA seq
DB search
MRSVDSSEDPFVKIASLIGGEEYHHVAKALLKTEDSTDEEIAIATGLRINIIRKVLYDLF
GKALITGIRVKDEKKGWFVYRWRAKRDNVDNFIDNQKKKILERLQNRLEYEESSEFYYCG
NSACDRIKFDYAIELFFKCPNCKEPLNMVDNSKLKDALRYKIEQLSTDSVK
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagtgttgacagtagtgaagatccttttgtaaaaattgcatctctaataggaggg
gaagaatatcatcatgttgccaaagcactgttaaaaactgaagattcaactgacgaagaa
atagctattgcaacaggtcttcgaataaatattattcgaaaagttctatatgatcttttt
ggaaaagctttgataacgggtatccgcgttaaagatgagaaaaagggatggtttgtgtat
cgatggagagcaaagagagacaatgtagataattttattgacaatcagaaaaagaaaata
ttggaaagattgcaaaatagacttgaatatgaagaatcatccgaattttactattgcggt
aattctgcttgtgatagaataaaatttgactatgcaatagagttattctttaaatgtcct
aattgtaaagaaccattgaatatggtggataacagcaaattgaaagatgctttaaggtat
aagatagaacaacttagtacagattccgtaaaatga
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