KEGG   Tumebacillus algifaecis: CIG75_10825
Entry
CIG75_10825       CDS       T04994                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
tab  Tumebacillus algifaecis
Pathway
tab02024  Quorum sensing
tab03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CIG75_10825
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CIG75_10825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tab03019]
    CIG75_10825
   03036 Chromosome and associated proteins [BR:tab03036]
    CIG75_10825
Messenger RNA biogenesis [BR:tab03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CIG75_10825
Chromosome and associated proteins [BR:tab03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    CIG75_10825
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: ASS75422
UniProt: A0A223D1F7
LinkDB
Position
complement(2609821..2610066)
AA seq 81 aa
MGVNTLNKQQINIQDHFLNQIRKDNIPVIIYLVNGFQIRGVVKAFDNFTIIVESEGKQQM
VYKHAISTFTPMKNVSFHAAE
NT seq 246 nt   +upstreamnt  +downstreamnt
atgggggtaaatactttgaacaaacaacaaatcaatatccaagatcactttctgaatcaa
atccgcaaggacaacattccggtgatcatttacctcgtgaacggtttccaaattcgaggt
gttgtcaaagcatttgacaacttcacgatcatcgtcgagtcagaaggcaagcagcaaatg
gtctataagcacgcaatctctacgtttaccccgatgaagaatgtaagttttcacgctgcc
gaataa

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