Tumebacillus algifaecis: CIG75_11440
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Entry
CIG75_11440 CDS
T04994
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
tab
Tumebacillus algifaecis
Pathway
tab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CIG75_11440
09124 Replication and repair
03420 Nucleotide excision repair
CIG75_11440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tab03021
]
CIG75_11440
03400 DNA repair and recombination proteins [BR:
tab03400
]
CIG75_11440
Enzymes [BR:
tab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CIG75_11440
Transcription machinery [BR:
tab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CIG75_11440
DNA repair and recombination proteins [BR:
tab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CIG75_11440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ASS75537
UniProt:
A0A223D2C2
LinkDB
All DBs
Position
complement(2778429..2780117)
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AA seq
562 aa
AA seq
DB search
MTCMSSSQQLAKPLIVQSDGTLLVETAHPDFATVRDQLLRFAELLKSPEHFHTYRISKIS
LWHAAAAGQTVQTVLGVLHEQSRYPLPLTLQQMVLTEMNKYGSLVLVPGEGCHLLQGERD
LLEEIRLLPELKAYLTGRKRNVLQVKENARGPLKRLLAQHGYPVQDRVGYVDGDALPLAL
CTETESGDAFLLRPYQQEAVRAFAAGDVDGGSGVVVLPCGAGKTVVGIAAIAKMQTNTLV
LTPNILAARQWIDELLDKTDLPADAVGEYSAERKDIRPITVTTYQMLTYRSGQTYPHFER
LNSRRWGLIVYDEVHLLPAPIFRLTADVQSTRRLGLTATLVREDGAEPDVFAMIGPKKYE
VPWKVMESGGFIAPTCCYEIDVPLPQDWRIRYASAAPRQKYRIASLNPRKYEVIAALLRK
HSEDRVLIIGQYIEQLDAAGELLGVPVLTGKTKLAEREELFRQFRAGEISVLIVSKVANV
AIDLPDANVAVQISGTFGSRQEEAQRIGRILRPNRDGSSSHFYTVVTRDTVDREMANHRQ
LFLTEQGYTYQVLHAEEIGGSF
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgacatgtatgtcctcttcacaacagctcgccaagccgctgatcgtccaatcggacggg
acgctccttgtggagacggcgcatccggactttgcgacggtgcgcgaccaattgttgcgc
tttgcagagcttttgaaaagccctgagcattttcatacatatcggatcagcaaaatttcg
ctatggcatgctgccgcggctggacagacggtacagacggtgcttggcgttttgcacgag
caaagccgctatccgttgccattgacgttgcagcagatggtgctgacggagatgaacaaa
tacggatcgcttgtgctcgttcccggtgagggctgtcacctcctgcaaggcgagcgcgac
ctgcttgaggaaatccgtctgttgccggagttaaaagcgtatttgactgggcgcaaacga
aacgtgttgcaggtcaaagaaaacgcacgcggaccgctcaagcgtctgctcgcccagcac
ggttacccggttcaagaccgtgtcggctatgtcgatggcgacgcgctgccacttgctctg
tgcaccgagacggaaagcggcgatgcctttttgctccgcccctatcagcaggaagcggtg
cgagcgtttgctgcgggcgatgtggatgggggcagcggagtggtcgtgctaccttgcggg
gcgggaaagacggtggtcggcattgcggcgatcgccaaaatgcagaccaatacgctggtg
ttgactccaaatatcctcgcagcccgtcagtggatcgacgaactgctcgacaagacggac
ctccctgccgatgcggtcggcgagtattcggcggagcgaaaggacattcgtccgatcacc
gtcacgacctaccagatgctgacctatcgcagtggccaaacttacccgcacttcgagcgc
ttaaacagcaggcgttggggtctgatcgtgtatgacgaggtacatctgctgcccgccccg
atctttcgtctgacggccgatgtgcagagcaccagacgcttagggctgaccgcgacgctg
gtgcgcgaagacggggccgagcctgatgtgtttgcgatgatcggcccgaaaaaatatgag
gtgccgtggaaggtgatggagtctggcggatttatcgccccgacctgttgctatgagatc
gatgttccgttaccgcaggactggcgcatccgttacgcttcggccgcgcctcgtcaaaaa
tatcgcatcgcgtcgctcaacccgagaaaatatgaggtgatcgccgctttgctgcgcaaa
cacagcgaagatcgggtactgatcatcgggcagtatatagagcagctcgacgcagcgggg
gaactgctcggagttcctgtgttgaccggcaaaaccaagctggccgagcgtgaagagctg
tttcgtcagtttcgggcgggagagatctctgtgctgatcgtctccaaagttgccaatgtg
gcgatcgatctgccagatgccaacgtggcagttcagatctccgggacgtttggttcccgt
caggaagaggcacagcgcatcgggcggatcttacgtcccaaccgtgatggtagcagctcg
catttttacacggtcgtcacccgtgatacggtcgatcgggaaatggccaatcaccgccag
ctgtttttgactgagcaaggctacacctatcaggtgctacatgctgaagagatcggggga
agcttttga
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