Tumebacillus algifaecis: CIG75_17045
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Entry
CIG75_17045 CDS
T04994
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
tab
Tumebacillus algifaecis
Pathway
tab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIG75_17045 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tab03019
]
CIG75_17045 (rnr)
03016 Transfer RNA biogenesis [BR:
tab03016
]
CIG75_17045 (rnr)
Enzymes [BR:
tab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CIG75_17045 (rnr)
Messenger RNA biogenesis [BR:
tab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CIG75_17045 (rnr)
Transfer RNA biogenesis [BR:
tab03016
]
Prokaryotic type
tRNA degradation factors
CIG75_17045 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
OB_RNR_1st
OB_Dis3
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ASS76495
UniProt:
A0A223D4N1
LinkDB
All DBs
Position
complement(3846315..3848684)
Genome browser
AA seq
789 aa
AA seq
DB search
MLTEERLLELMSGLEYKPMTIAELEDHFSIDNTDGLEELIQILRLMEDTGQIVRTRSDAF
GVPEKMNLVVGKLQGKSKGFGFVIPEDSVKWPQDLFVAAGDMNGAMHGDRVIARINKKGG
GKRQEGEIIRILERATKTVVGTIVTMTGRYAFVTPDDKRLGQDIFLAEEDYNGAKEGHKV
VVEITAYPEGWRNPQGRVLEVLGNPDDPGVDILSVIRKFGLPEEFPEEVLEAANDAPDLI
TERDMAGRKDLRDWVCVTIDGEDAKDLDDAVNVERLDNGNYLLGVHIADVSYYVREGEPL
DQEAYARGTSVYLVDRVIPMLPHRLSNGICSLNPQVDRLTMTCEMEFSPSMELVRHDIYP
SVINTTERMTYTNVRKILTEPDQHPDLMERYAALVPMFQTMEELAMKLRDRRMDRGAIDF
DFQETKIIIGADGKVADIKKRERTIAEMIIEECMLAANETVSEHFFWMNIPFLYRIHEEP
DADRLQNFNEFIHNFGYHIKGAGGNNKIHPHALQELLVKVKGSQEERIINTVMLRSLKQA
KYSPEPLGHFGLAAKYYSHFTSPIRRYPDLQIHRIIRDVINNGGKLSNERIERLQEMMDT
VGKHTSERERVAVEAERETDDMKKVEYMLDKVGEVFEGIVSGVTSFGMFVELENSIEGMI
HISYMIDDYYNFNEKQYCLIGERTGRIYRIGDPVKIKVMGANKTDRTIDFQLLNHVKNNE
QRAELAERRKTKQVKGSKVAGKGGNANAKANAGKKTAEKKKTGRTPAELAELKQAVNKAR
RKNKKRKAR
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
gtgctaaccgaagaacgactgttagaactgatgagcgggcttgaatacaagccgatgacc
atcgctgaactggaagaccatttcagcattgacaacacggatggactggaagagctgatc
caaatccttcgcttgatggaagacaccgggcagatcgtccgcaccagaagtgatgcgttt
ggtgtacctgaaaaaatgaatctggtcgtagggaaactgcaaggcaaatcgaaagggttt
ggctttgtgatcccggaagacagtgtgaaatggccgcaagacttgtttgtggcagcaggc
gatatgaatggtgcgatgcatggcgaccgcgtcatcgcccgcatcaacaagaaaggcggc
ggcaagcgtcaggaaggcgagatcatccgcatcttggagcgtgccacgaagacggtcgtc
ggtacgatcgtgacgatgacgggccgctatgcgtttgtcacccctgatgacaagcgtctt
ggacaggacatctttttggctgaggaagattacaacggggcaaaagagggtcacaaggtc
gtggtggagatcactgcctacccggaaggctggcgcaatccgcagggtcgggtgctagaa
gtgctcggcaacccggacgatccaggcgtggatatcctgtcggtaatccgcaaatttgga
ctgccggaagagttcccagaagaggtgctggaagcggcgaacgacgcacccgatctgatc
accgaacgtgacatggcaggccgcaaagacctgcgcgattgggtctgtgtgacgatcgac
ggcgaagacgcgaaagaccttgacgatgcggtcaacgtcgaacggcttgacaatggcaat
tacctgctcggcgtacatatcgcagacgtgtcctactacgttcgcgaaggggaaccgctc
gatcaggaagcgtatgcgcgcggtacgtccgtctatctcgtagaccgcgtgattccgatg
ttgccgcatcgtttgtccaacgggatctgttcgttgaacccgcaggtggatcgcttgacg
atgacctgcgagatggaattttccccgagcatggaactggtgcgccacgacatctacccg
tcggtcatcaatacgacggagcgcatgacctatacgaacgtgcggaaaatcctgactgag
ccagatcaacatccggacttgatggagcgctatgccgcgctggtgccgatgttccaaacg
atggaggaactggcgatgaaactgcgcgaccgccggatggaccgcggtgcgatcgacttc
gattttcaggagacgaagatcatcatcggcgcggacggcaaagtagccgacatcaaaaag
cgtgagcgcacgattgctgagatgatcatcgaagaatgcatgctcgcggccaatgagacg
gtatctgagcacttcttttggatgaacatcccgttcctgtaccggattcacgaagagccg
gatgctgaccgtctgcaaaatttcaacgagtttatccacaacttcggctaccacatcaaa
ggggcgggcggcaacaacaagattcatccgcacgcgctgcaagagttgctggtaaaagtg
aaagggtcgcaggaggagcggatcatcaacaccgtcatgctgcgctcgttgaagcaggcg
aaatattcgccggagccgctcggccatttcgggctggctgccaaatactacagccacttc
acttcaccgattcgccgctatccggacttgcagattcaccggatcattcgcgatgtgatc
aacaacggcgggaagttgagcaatgagcggatcgagcgtcttcaagagatgatggatacg
gtcggcaagcacacgtcagaacgcgagcgcgtcgcggtggaagcggagcgcgagacggac
gatatgaaaaaggtcgaatacatgttggacaaagttggcgaagtgttcgagggcatcgtc
agcggcgtgacctcctttgggatgttcgttgagttggaaaattcgatcgaggggatgatt
catatctcctacatgatcgacgactattacaacttcaacgagaagcagtattgcctgatc
ggggagcgcacaggtcgcatctaccgcatcggtgatccggtgaagatcaaagtgatgggt
gcgaacaagacggatcgcacgatcgacttccaactgctcaaccatgtgaaaaacaacgag
cagcgcgccgaattggccgagcgccgcaagaccaaacaggtcaaaggcagcaaggtagca
ggtaaaggcggcaacgccaacgctaaggctaacgctggcaaaaagacggcggagaaaaag
aagacgggacgcacaccagccgaactggccgaattgaagcaagcggtgaacaaagcgcgt
cgcaaaaacaaaaagagaaaagcccgctga
DBGET
integrated database retrieval system
