Tumebacillus algifaecis: CIG75_19765
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Entry
CIG75_19765 CDS
T04994
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tab
Tumebacillus algifaecis
Pathway
tab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CIG75_19765 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tab03021
]
CIG75_19765 (rpoC)
03400 DNA repair and recombination proteins [BR:
tab03400
]
CIG75_19765 (rpoC)
Enzymes [BR:
tab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CIG75_19765 (rpoC)
Transcription machinery [BR:
tab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CIG75_19765 (rpoC)
DNA repair and recombination proteins [BR:
tab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CIG75_19765 (rpoC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ASS76935
UniProt:
A0A223D5W2
LinkDB
All DBs
Position
complement(4376046..4379708)
Genome browser
AA seq
1220 aa
AA seq
DB search
MLDVNNFEYMKIGLASPEKIRSWSHGEVKKPETINYRTLKPEKEGLFCEKIFGPTRDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRSLEEVIYFASYVVTSAGDTPLEYKQLLSEKEYRSYREKYGYAFDAGMGAEAIKKLLL
QVEVEKEVVQLKEELKTAQGQRRNRAIKRLEVMEAFRTSSNAPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPHLRMYQCGLPKE
MALELFKPFVMKELVAKGLAHNIKSAKRKVERVSAEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAHNIL
NPKDGKPVVTPTQDMVLGSYYLTMDRISEHGEGRVFHSPTEAVMAYDTGQMSLHTRIIIP
AKVLGKTSFTEAQQNSYLITTPGKIIFNEIFPADFPYINSAKQENLLKGTPDQFFIFDKS
SDFREAAANLEAQSAVVKGYLGQIIAECFRRYGTTVTSETLDKIKALAFKYSTRAGITIS
VADIIVPKAKYDVITQAEEKVASVTKQFRRGLITDDERYDRVISVWSKAKDEITTVLMGS
LDRFNPIYMMAHSGARGNVSQITQLAGMRGLMANPSGRIIELPIKSNFREGLTVLEYFIS
THGARKGLADTALRTADSGYLTRRLVDVAQDVIVRQQDCGTDKGVWAEEIRDGKEVIEEL
IDRIVGRIAFQPVVHPETGEVIVEENELIDEEMGRTIIAADIERVYIRSITACRTQHGVC
INCYGRNLATGNMVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEL
FEARNPKGQAIITEIDGAVSDIREVKDKREIEISGNAEVKVYPVPYGSRIRVTKGQVIEA
GDELTEGSIDPKDMLKVKGIHGVQMYLLREVQRVYRLQGVEINDKHVEVMVRQMLRKVRI
IDAGDTNLLPGTYVDIYEFEKANLPVLIGGTGEPAVARPALLGITKASLETDSFLSAASF
QETTRVLTEAAIKGKVDRLLGLKENVIIGKLVPAGTGMSRYRNIKIEDGTESNEETASTD
IENQEEIVGSELETVETVVE
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
ttgttggacgtcaacaactttgagtacatgaagatcgggttggcatccccggaaaagatc
cgctcgtggtcgcacggggaagtcaaaaagcctgagacgatcaactaccggaccctcaag
cctgaaaaagaaggtctgttttgcgaaaaaatcttcggacccactcgcgactgggaatgt
cattgcggcaaatacaagcgcgttcgctataaaggcgtcgtctgtgatcgctgcggtgta
gaagtcacgcgtgcaaaagtccgtcgggagcgtatggggcacatcgaacttgctgccccg
gtctcccatatctggtacttcaaaggcatcccgagccgcatgggtctcgttctcgacatg
agcccgcgctcgctcgaggaagtaatctacttcgcatcctacgtggtaacctctgcgggc
gatacgccgcttgaatacaagcagctgctgtccgagaaggaatatcgttcgtatcgcgaa
aagtacgggtacgcttttgatgctggtatgggggcagaagcgatcaagaaacttctgctt
caagtcgaagtggaaaaagaagtcgtgcagttgaaagaagagctgaagaccgctcaaggc
cagcgtcgcaaccgtgcgatcaagcgccttgaggtgatggaagcgttccgcacgtcctcc
aacgcaccgtcttggatgattctcgacgtgctgccggtcattccgccggaactgcgcccg
atggtccaattggacggcggccgttttgcgacttccgacttgaacgacctgtaccgtcgc
gtgatcaaccggaacaaccgcctcaagcgtctgcttgatctcggtgcaccggacatcatc
gtgcaaaatgaaaagcggatgttgcaagaagcggtcgatgcgctgatcgacaacggccgt
cgtggtcgtccggtcaccggtcctggtaaccgtccgctcaaatcgctctcccacatgttg
aaggggaaacaaggccgcttccgtcaaaacttgctcgggaagcgtgttgactactccggc
cgttccgttatcgttgtcggtccgcacctgcgtatgtatcagtgcggtctgccaaaagag
atggcgcttgagctgttcaagccgttcgtcatgaaggaactggtggcgaaaggtctcgcc
cacaacatcaagagcgcgaagcgcaaagtagagcgtgtctccgcagaagtttgggacgta
ctcgaagaggtgatcaaggaacatccggtgctcctcaaccgcgcaccaaccttgcaccga
cttgggattcaggcgttcgaaccgacactggtcgaaggccgtgcgatcaaactccatccg
ctcgtctgtacggcgtacaacgccgacttcgacggcgaccagatggcagttcacgttccg
ctctcggcagaagcacaagcggaagcgagactgttgatgctggctgcacacaacatcctc
aacccgaaagacggcaagccggtcgtcacgccgacgcaggacatggttctcggctcctat
tacctgaccatggaccgcatcagtgaacacggtgagggtcgtgtgttccactcgccgacc
gaagcggtgatggcgtatgatacgggtcaaatgtccctgcatacgcgaatcatcattccg
gcgaaagtgctcggcaaaacttcgtttaccgaagcgcagcaaaattcgtatctgatcacc
acgcctggtaagatcatcttcaacgaaatcttcccggccgacttcccctacatcaactcg
gcgaagcaggagaacctgctgaaggggacgcccgatcagttcttcatttttgacaagtcg
tccgacttccgtgaggcggctgccaaccttgaagcgcagtctgctgtcgtcaaaggctac
ttaggccagatcatcgcagaatgcttccgtcgctacggcacgactgtcacctcggagacg
ctcgataagatcaaggcgttggcgttcaaatactcgaccagagcagggatcaccatctct
gtagcggacatcatcgttccgaaggcgaagtacgacgtgatcacacaagcggaggaaaag
gttgcctcggtaaccaagcagttccgccgtggtctgatcaccgatgatgagcgctatgac
cgtgtcatctccgtctggtcgaaagcgaaagacgagatcacaaccgttttgatgggctcg
ctcgaccgcttcaacccgatttacatgatggcgcactccggtgcgcgcggtaacgtatcg
cagatcacccagctcgcagggatgcgcggtctgatggcgaacccgtcgggtcggatcatc
gagttgccgatcaagtcgaacttccgcgaaggtctgaccgttctcgagtacttcatctcg
acgcacggtgcgcgtaaaggtcttgccgataccgcgctgcgtactgccgactccggttac
ctcacccgtcgtctcgttgacgttgcacaagacgtcatcgtccgtcagcaagattgcggc
accgacaaaggggtatgggcggaagagattcgcgatggcaaggaagtcatcgaggaattg
atcgaccgcatcgtcggtcgcatcgcgttccaaccggtcgttcacccggaaactggcgaa
gtgatcgtggaggagaacgaactgatcgacgaggagatgggccgtacgatcatcgcggcc
gacatcgagcgcgtctacatccgttcgatcaccgcttgccgcactcagcatggcgtctgc
atcaattgctacggacgcaacctggcgacaggcaatatggttgagatcggtgaagcggtc
ggcatcatcgccgcacagtcgatcggtgaaccgggtacccagctcaccatgcgtacgttc
cataccgggggcgttgcgggtgatgacatcacccaaggtttgccgcgtatccaagagctg
tttgaagctcgtaacccgaaaggtcaagcgatcatcacggagatcgacggcgctgtgtct
gacattcgtgaagtcaaagacaagcgcgagatcgagatttccggtaacgctgaagtcaaa
gtgtatccggttccgtacggttctcggatccgcgtgaccaaaggtcaggtgatcgaggct
ggtgatgagctgaccgaaggttcgattgacccgaaagacatgctgaaagtcaaagggatt
catggcgtgcagatgtacttgctgcgcgaagtacagcgcgtataccgtctgcaaggcgtt
gagatcaatgacaagcacgttgaggtcatggtccgtcagatgttgcgcaaagtccgcatt
atcgacgcaggagacaccaacctgctgccgggtacctatgttgacatctatgagtttgag
aaggccaacctgcctgtgctgattggcggcactggcgagccggctgtcgcgcgtccggcg
ctgcttggtattaccaaagcatcgcttgaaaccgactccttcctgtcggctgcttccttc
caggagaccactcgtgtcctgaccgaagcggcgatcaaggggaaagtggaccgtctgctc
ggcctcaaagagaacgtcatcatcgggaagctggttccggccggcaccggtatgtcgcgt
tatcgcaacatcaagattgaagatggcaccgaatcgaacgaagaaacagcttcgactgac
atcgagaaccaagaagagatcgttggatctgaattggagacggttgaaacggtcgttgaa
taa
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integrated database retrieval system
