Thermoplasma acidophilum: Ta0020
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Entry
Ta0020 CDS
T00037
Name
(GenBank) conserved hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tac
Thermoplasma acidophilum
Brite
KEGG Orthology (KO) [BR:
tac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tac03016
]
Ta0020
Enzymes [BR:
tac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Ta0020
Transfer RNA biogenesis [BR:
tac03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Ta0020
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
CAC11169
UniProt:
Q9HM49
LinkDB
All DBs
Position
17617..18135
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AA seq
172 aa
AA seq
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MRAFIAVQIKPSDYLANVFRIFGSIKGIKVTEYGNVHLTIKFLGDIDDGKASEICRGISG
IEASSFYLETEGIGAFPSLARPRVIYVECRSDGLYRLLAEVGKFVPIEKDFIPHITIGRV
KHKIAMPDIEFKKEKYSVDEVCLFKSELKPSGPIYTRICCKHLENIDKNEGV
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgctttcatagcggttcagataaagccaagcgattatcttgcaaacgtattcaga
atattcggcagcataaagggcataaaggtaactgagtatggcaatgtccacctcacaatc
aagtttctcggtgatatcgatgatggaaaggcatcggaaatatgccgaggcatcagcggt
atagaagccagcagtttctatctggaaacagaaggcataggtgccttcccttccttagcc
aggccaagggttatatatgtagaatgcagatcagatggcctctacaggcttttagcagag
gttggaaaattcgtgccgatagagaaggatttcatcccgcacataacgatcggaagggtc
aagcacaagatcgccatgcctgacatagagttcaagaaggaaaaatacagtgtggatgag
gtatgcctgttcaaaagcgaacttaaaccatcagggcccatatacaccagaatatgctgc
aaacatctagaaaatatagataaaaatgaaggtgtctga
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