KEGG   Thermoplasma acidophilum: Ta0838
Entry
Ta0838            CDS       T00037                                 
Name
(GenBank) Large helicase related protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
tac  Thermoplasma acidophilum
Brite
KEGG Orthology (KO) [BR:tac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tac03400]
    Ta0838
Enzymes [BR:tac01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Ta0838
    5.6.2.6  RNA 3'-5' helicase
     Ta0838
DNA repair and recombination proteins [BR:tac03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Ta0838
SSDB
Motif
Pfam: DEAD Helicase_C WH_Lhr DEAD_assoc ResIII Cas3-like_C_2 Rota_NSP4 DUF3701
Other DBs
NCBI-ProteinID: CAC11967
UniProt: Q9HJX4
LinkDB
Position
901492..904176
AA seq 894 aa
MSNSFSYLDERIIAMLRDRGITDPTDPQEQIIPLVLEGKNVLLLSPTGSGKTEAAVLPVF
QRILREKPKKVFALYITPLRALNRDILSRLVDYGRELGIDVQVRHSDMSDADKRRMAESP
PDILVTTPESLQILLNGKNLRRFIANVRVVIVDELHDAAENERGSQLSLALERLRDLAGN
FQRIGLSATVGNPGDLARFLVPNGTCEIISTTLKKNMSIDVMVPDESSEEDAEVMGCDRQ
YAGAILKVWDLINRHAGSLVFVNRRFVAEDLAFRLKLKFGEIPVLVHHGSLSKETREFAE
RSFKNGEVKALICTSSLELGIDVGTANAVIQFNSPRQINKMIQRIGRSEHWIGKTSKGYV
VCTDVIEMEEAIAIVDSIAEGKIENVQIMKNSLSTLANQILSEINAQGKVNVKNFFETVK
RSYAYADLPWDEYYSVVSFLASTRKLWLEDELMGRRRNTLKYYIENISMIPSEKNYKVID
TGGKFIGTLDERYVASEIDAGSYFVMRGNTWRVVRIDHDRILVESFFTPAIAPRWTGEDI
PVLYDVVQRVSANRKSRSILNYIDDASARKLEEWYQNDIATVDRVIIESFNDEIIIQILL
GTRGNFALAEILSNVLTSITGESVEMDFSPYHIYLRTSRKIYAEDVMRMIKSINLENLNS
YIRSSASRSRFFKSVFLYEARKFGIISEDADLERIRVDKIMDAYSESVVFEDSIRKLIND
YMDIDAITSFIGSLDTVQFVLKDKISKASDIFISHYSERVAPLRPTKVILESVRNRILNE
RVTLYCVSCGNVRTYRVRDIKVPKCDVCGSRLVAALSDFERAKIDDPSYRKRILKNAHLV
KEKGIQAVMVLSARGVGPETASRILEVTYANEDDLIRSILTAEMDYARNRRFWD
NT seq 2685 nt   +upstreamnt  +downstreamnt
atgtcaaactcattttcctatctagatgagagaatcatagcgatgctccgcgacaggggc
ataacggatcctacagatccgcaggagcagataataccccttgtcctggagggaaagaac
gtactcctgctgtcgccaaccggcagcggcaagactgaagcagcggtgcttcctgtattc
cagaggatattgagggagaagccgaagaaggtcttcgcattatacataacgccgctcagg
gcgctgaaccgcgatatactttcacgccttgtagactacggcagagaacttggcatagat
gtgcaggttaggcacagcgatatgagcgatgcagataagcgaaggatggcggagagccct
ccggacattctcgttacgacgccggaatctctgcagatacttcttaacgggaagaacctg
agacgcttcatcgcaaacgtgcgtgtcgtcatagtggatgagctgcacgatgctgcagaa
aacgaacgtggatcacagctgtcgcttgcactggagcggctgagggatcttgctggcaac
ttccagcgaataggcctttcggcaaccgtcggaaatcctggagatctcgccaggtttttg
gttccaaatggaacctgcgagatcatctcaactacgctgaagaagaacatgtccatagac
gtcatggtaccggatgaatccagcgaagaggatgccgaggtcatgggatgcgatcggcag
tacgccggtgctatactcaaggtctgggatctcataaacaggcatgctggatcgctcgta
tttgtgaacaggcgattcgtagctgaggatcttgcattcaggctgaagctaaaatttgga
gaaataccggtactggtgcaccacggatcgctttcaaaggagacaagggagttcgcagaa
agatcgttcaagaacggagaggtcaaggcattgatatgcacgtcatctctagaactcggc
atagatgttggaacggcgaatgcagttatacagttcaattctcccaggcagataaacaag
atgatacagcgcataggaagaagcgaacactggataggaaagacctctaagggctacgtc
gtatgcacggatgtcatagagatggaggaggcaatagccatcgtagacagcatagctgag
ggaaagatagagaacgtccagattatgaagaactcgctttctacgcttgcaaatcagatt
ctatccgagatcaacgcacagggaaaggtgaacgtcaagaacttcttcgaaacggtcaag
cgatcgtacgcctacgccgatctgccatgggacgagtactactccgttgtcagcttccta
gctagcaccaggaagctgtggctggaagacgagctcatgggcaggaggaggaatacgcta
aaatattacatagagaacatatccatgatacccagcgaaaagaactataaggtaatagat
acgggcggtaagttcataggaacgcttgatgagaggtacgtggcatccgagatagatgcc
ggcagttacttcgtcatgaggggcaacacctggcgtgtcgtgaggatcgatcatgaccgc
atacttgtagaatctttcttcactcccgccatagcgcccaggtggacgggcgaagacata
ccggtcctttacgatgttgtgcagagggtctccgcaaatcgcaaatcgagatccatcctt
aactacatagacgatgcctcggcaaggaagctggaagaatggtatcagaacgacatcgca
acggtggacagagtcataattgaaagcttcaacgacgagataatcatacagatactgctt
ggcacaaggggtaatttcgctcttgctgagatactttcgaatgtgctcacatccatcacc
ggtgaaagcgttgagatggacttttcaccgtatcacatatatctgcggacttccaggaag
atctacgctgaggatgtcatgcgcatgataaagagcataaacttggagaaccttaattcc
tacatcagatcatccgcgtctagatcccgcttcttcaaatccgtgttcctgtacgaggcc
aggaaattcggcataataagcgaagatgccgatctagaaaggataagggtggacaagata
atggatgcctattcggaatccgtcgtatttgaggactccatcagaaagctcatcaacgat
tacatggatatagatgcgatcacgtctttcataggatctctcgatacagtgcagttcgtg
ctgaaggataagatatcaaaggcatccgatatcttcatatcgcattactctgagagggtt
gcaccactaaggcctacaaaggtgatacttgaatctgtcagaaaccgcatattgaacgag
cgtgtgacgctctactgcgtcagctgcggcaacgtgcgcacctaccgcgtcagggatatc
aaggtacccaaatgcgatgtatgcggatcaaggcttgttgctgccctgtccgatttcgaa
agggcaaagatagatgatccatcgtacaggaagcgcatactgaagaatgcccaccttgta
aaggaaaagggcatccaggccgttatggttctttcagcaaggggggttggcccggaaacc
gcatcgaggattctggaggtaacctatgcgaacgaagatgatctgataagatcgatcctg
acggcagagatggattacgccagaaaccgcagattctgggactag

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