Thermoplasma acidophilum: Ta0929
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Entry
Ta0929 CDS
T00037
Name
(GenBank) conserved hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
tac
Thermoplasma acidophilum
Pathway
tac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ta0929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tac03019
]
Ta0929
Messenger RNA biogenesis [BR:
tac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Ta0929
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
Ta0929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
Trm112p
Auto_anti-p27
Rho_RNA_bind
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
CAC12058
UniProt:
Q9HJN8
LinkDB
All DBs
Position
complement(998167..998781)
Genome browser
AA seq
204 aa
AA seq
DB search
MEGDKKVAFPGDIIATTEEYLPGRNTEEKNGEIVATKFGNIVRDDINLMISVDTGKKEFF
LRKGDVVYGQVIKNDAHRYIVRVVGVFQRGTGLKEVDEEMQLSFGMSRRPQSDFVAVGDL
IRGYVVRTGDMPEISINGNHYGVISAVCSRCRQPLVKKNITLYCENCQRTEIRKIADDYG
SVDIFNYENRITHGSSHSEARRQN
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagataaaaaagttgcttttcccggagacataatcgccacaactgaggagtat
ctgccaggaaggaatacagaggagaagaatggggagatagtagcgacaaagttcggaaac
atagtgcgggatgatataaacttaatgatatctgtagatacgggaaagaaggagtttttc
ctcaggaagggcgatgttgtatacgggcaggttatcaagaacgacgctcacaggtacatc
gtaagggttgtaggggtatttcagaggggaactggcctgaaagaagtagatgaggagatg
cagctttcctttggcatgtctaggaggccacagtcagatttcgttgcagtaggtgatctg
ataaggggatatgtggtacgaactggtgatatgcctgaaatatccataaatggcaaccac
tacggtgttataagcgctgtgtgctccagatgcaggcaaccgcttgtgaaaaagaacata
acattatactgtgaaaactgccagcgcactgaaatacggaaaattgcagacgactatggc
agcgtagatatattcaattatgaaaacaggataacccatggaagtagccatagcgaggcc
cgtaggcagaattaa
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