Thermoplasma acidophilum: Ta0940
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Entry
Ta0940 CDS
T00037
Name
(GenBank) transcription initiation factor IIB related protein
KO
K03124
transcription initiation factor TFIIB
Organism
tac
Thermoplasma acidophilum
Pathway
tac03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tac00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Ta0940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tac03021
]
Ta0940
Transcription machinery [BR:
tac03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Ta0940
Prokaryotic type
Archaeal type
TFB
Ta0940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Zn_ribbon_LysW
RB_B
Cyclin_N
Lar_restr_allev
Sigma70_r4
Trm112p
AAA_lid_9
HTH_Tnp_ISL3
UPF0253
HTH_AsnC-type
At4g08330
Zn_ribbon_PaaD
Zn_ribbon_8
Zn_ribbon_IS1595
Zn_ribbon_3
Ribosomal_S27e
DUF7573
Zn_ribbon_tTFIIB
Auto_anti-p27
Zn_ribbon_9
Motif
Other DBs
NCBI-ProteinID:
CAC12069
UniProt:
Q9HJM7
LinkDB
All DBs
Position
complement(1008566..1009504)
Genome browser
AA seq
312 aa
AA seq
DB search
MVENTKKKKVEEIERCPECGSTNLIRDYEHGELVCGECGAVIEDAYIDQGPEWRAFDSEQ
NESRARAGSPMTYTIHDKGLSTDISWKNKDSYGRSIPTRNRAQLYRLRKWQKRIKVSNAA
ERNLSQALQELERMASNLSIPDDVKETAAVIYRKAVKQNMIRGRSIEGVVAGALYAACRI
TNVPRTLGEIASVTRVKKKEIGRTYRIMSRYLKLNIMPSKAEDYISRFCSKLKLSMDTRN
KALEILRSAENAGLTSGKGPTGVAAAAIYIASLMTGERRTQRAVAEVAGVTEVTIRNRYK
ELTEKLQLNVEQ
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaaatacgaaaaagaaaaaggttgaggagatagaaagatgccctgaatgcggt
tccaccaatcttataagggattacgagcatggagaacttgtctgcggagaatgcggggcg
gtcattgaggatgcctatatcgatcaggggccagagtggagggcattcgactctgagcag
aatgaaagcagggccagagctggatccccaatgacctacaccattcacgataagggtctt
tctacagacatatcatggaagaataaggattcgtatggaagatccataccgacaaggaac
agggcccagctgtacaggctcagaaagtggcagaagaggataaaggtatcaaatgcagcc
gaaagaaacctttcacaggcactccaggagcttgagaggatggcctcaaacctgagcata
ccggacgatgtgaaggaaaccgcagcggttatttaccgcaaggctgtaaaacagaacatg
atacgcggccgaagcatagagggcgttgtagcaggagcactctatgcggcctgcaggata
actaacgtacccagaacgctcggtgagatagcctcggtcacaagggtgaagaagaaggag
ataggtcgaacctataggataatgagcaggtatctaaagctgaacataatgccttccaag
gccgaagactatatcagcaggttctgttcaaagctgaagttatcgatggataccaggaat
aaggccctcgagatactgagatctgccgagaatgcgggtctgacttcgggcaaggggcca
acaggagttgcggctgcggcgatatacatagcatcgctgatgaccggtgaacggagaacg
cagagagctgttgccgaggttgctggtgtaaccgaggttacgataagaaacagatacaag
gaactcactgagaaactgcagctcaacgtagagcagtga
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integrated database retrieval system
