Thermoplasma acidophilum: Ta1000
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Entry
Ta1000 CDS
T00037
Name
(GenBank) DNA helicase II (UvrD) related protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tac
Thermoplasma acidophilum
Pathway
tac03420
Nucleotide excision repair
tac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ta1000
03430 Mismatch repair
Ta1000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tac03400
]
Ta1000
Enzymes [BR:
tac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ta1000
DNA repair and recombination proteins [BR:
tac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ta1000
MMR (mismatch excision repair)
Other MMR factors
Ta1000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
Viral_helicase1
UvrD_C_2
AAA_11
AAA_30
AAA_12
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAC12129
UniProt:
Q9HJG8
LinkDB
All DBs
Position
complement(1069858..1072515)
Genome browser
AA seq
885 aa
AA seq
DB search
MNANVVIAGPGTGKTTSISQKYLELVQSGVDPNDILCITFTNKAAENMRSRIIKALERSG
TQIDLSVINVYTFHSFANSAIRRYGYRGIVNQNFLRKIIFDYLIRNSVFNYEREYLISRI
VPQLENIIRYLGSFGIDRIENPEETAASLREIFKKRREEKKIKEDLEEITAIFIHLSKIM
DEYRNAKEARGVIDYNDMIIKFLELEKKPHFKYVLVDELQDASDLQARLIKSVADDIYAV
GDRKQAIFGFQGGGFGNFSNHFPDAHVNYLLTDHRNSEAVLNYAREFFLKNTKYPDQYRT
ELDQLKASKARGGSVEVVSGEEEAVLDLLKRFPEGKVGILARRNDQVIKISEILDSNGMR
YASSALSAASDRAKKDVIAFLKMIIYGDMQSVIDALFTPFSGLQISEAYDIKESLISGNT
SLQNYDLLNNLRRTYSAPGINGLIDMFEKLIIPIALAFDQRYFLTVERIYKNLREYLDFY
GNEDRSDLINYLEICDDEVQEIDADERISVLTVHKAKGLEFDHVIYLPKAKKDEKMSAVD
LVAEQMIRLKTGRDISVDLEDEDTRVDFVAITRAAQNLVIVSDDERYLNRFSMKGGSITA
STSTMSKDYYDIKREPYLAFVRGDLKHASDMIHEEGRIRKLIYSGIRKNNVISFSLLASL
EDPFRFLKDHILGLKYTSPAMGFGTSIHSIAQDVFEGNVQAEQIPERLRPYYWNILNIMK
KIQDVYGMSQIGSELEVKIPGSAYMREADAFILYGRIDAVFSDGEKYLIVDYKTDKRKNS
GNHYGDQLAFYRMLYSKANHIDPSRVKTAIAYIGLRPGVNTGRIDWDLYPMEKNDSKIRD
LIRKYVQYCTDPEAFIDDLISMGPDRTEDTLYDRIVAILTAGSKL
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcaaacgttgtaatagctggaccaggtactggaaagacaacgagcatatcgcaa
aaatatcttgaactggttcagagcggagtggatccaaacgatattctgtgtatcaccttt
accaacaaggcagctgaaaatatgaggagcaggataataaaggcgcttgaacgttccggg
acgcagatcgatctaagcgtcataaacgtttacacctttcattcctttgccaattctgca
ataaggaggtacggatacaggggaatcgtgaatcagaatttcctcagaaagatcatattc
gattacctgataaggaacagcgttttcaactatgagagagaatacctgatctcaagaata
gtaccacagctagaaaacataatcaggtacctgggaagcttcggaatagatcgtattgag
aatcctgaagaaactgcggcatcgctcagagagatcttcaaaaagcgcagagaggaaaag
aagataaaggaggatctcgaagaaataaccgccatcttcatccatttgagcaagatcatg
gatgaatatcgcaatgccaaggaagcgagaggggtgatcgactacaacgacatgataata
aaatttctggaacttgagaaaaaaccgcatttcaaatatgttctggtggatgagctgcag
gacgcaagtgatctgcaggcaaggctcataaaatcagttgcagatgatatatacgcggtt
ggagatagaaagcaggccatcttcggtttccagggaggagggtttggaaatttcagcaac
cattttccagacgcccatgtaaactacctgctgacggatcacagaaattcagaggccgtt
ctcaattatgcgcgtgaattcttccttaaaaacacaaaatatccagaccagtataggacc
gaactagatcagctaaaagcctctaaagccaggggcggttcagttgaagtcgtcagcgga
gaggaagaagcagtcttagatctcttgaagagatttccagaaggcaaagtgggcatactc
gcaaggcgcaatgaccaggttataaagatatccgaaatactggacagcaatgggatgaga
tatgcgtccagtgcactttctgcggcaagtgatcgggcgaagaaggatgtcatcgcattc
ctaaaaatgataatctatggagatatgcagagcgttatagatgcgctattcacaccattc
agcgggttacagataagcgaggcgtatgacattaaggaaagcctcataagcgggaacact
agcttacagaactatgatctactgaacaacctgagaaggacttattcagccccaggaata
aatgggctcatcgacatgttcgagaaactgataattcccatcgcgttggctttcgatcag
cgctatttcctgacggtggaaaggatatataagaacctcagagaatacttagatttctat
ggcaacgaagatagatccgacctgataaactatctggagatctgcgacgatgaggttcag
gaaatagatgcggatgaaaggatctctgttctgactgttcacaaggccaaggggctcgaa
tttgatcatgttatatatcttccgaaagccaagaaggatgaaaagatgagcgccgtggat
cttgtggccgagcagatgatcaggttaaaaacaggtcgggatatctctgtggaccttgag
gatgaggacacacgggtagattttgttgccataacacgcgcagcccagaatcttgtgatc
gtttcggacgacgaacggtatcttaaccggttttcaatgaaggggggctcaatcacggca
tctacatccacaatgagcaaggattactatgatatcaagagggaaccataccttgccttt
gtacggggagacctgaagcatgcctcggacatgatacacgaagagggcagaatacgaaaa
ttgatatattctggcatcaggaagaacaacgtgatctcattttcactgcttgcgtcactt
gaggatccattcaggttcctcaaggaccacatactcgggctcaagtatacgagtcctgcc
atgggattcggtacctccatacattccatagcacaggatgtttttgaaggcaatgtacag
gcagaacagatacctgagaggctgaggccttactactggaatatcctaaacataatgaag
aagatacaagatgtttacggcatgagccagatcggcagcgaactggaggtcaagataccg
ggttctgcctacatgagggaggcagatgcattcatactctatgggaggatagatgcggtc
ttcagcgatggtgagaaatatctcatagtagattataaaacagacaagaggaagaactct
gggaatcattatggtgatcagctcgctttctacagaatgctgtattccaaggccaaccat
atagatcccagcagagttaagactgccatagcttatataggtctacgtccaggggtgaat
accggcaggatagactgggacctttaccccatggaaaagaacgattcgaagataagggat
ctcatacgcaaatacgttcagtactgcacagatccggaggcattcatagacgatctgata
agtatgggtccggacagaacagaggacacgctatacgatcgcatagttgcgatactcacc
gctggaagcaagctgtaa
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