KEGG   Thermoplasma acidophilum: Ta1035
Entry
Ta1035            CDS       T00037                                 
Name
(GenBank) DNA repair protein RAD2 related protein
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
tac  Thermoplasma acidophilum
Pathway
tac03030  DNA replication
tac03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Ta1035
   03410 Base excision repair
    Ta1035
   03450 Non-homologous end-joining
    Ta1035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tac03032]
    Ta1035
   03400 DNA repair and recombination proteins [BR:tac03400]
    Ta1035
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tac04147]
    Ta1035
DNA replication proteins [BR:tac03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Ta1035
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Ta1035
DNA repair and recombination proteins [BR:tac03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Ta1035
Exosome [BR:tac04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Ta1035
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc SAMD1_WH DUF2576
Other DBs
NCBI-ProteinID: CAC12164
UniProt: Q9HJD4
LinkDB
Position
complement(1107344..1108354)
AA seq 336 aa
MGTDISDIVVSHETSLKDQGNQTFSIDTYNILYQLLSNVRQYDGMPLMDSHGNVTSHLYG
IFYRTINLLENRIRPVYVFDGKPSPLKNRTISERQMMKEKAKAELEEAIERGEEDLRQYY
SRINYITPQIVDDTKKLLDYMGIPYVDAPSEGEAQASYMTKKNVDGVISQDYDCLLFGAR
KILRNFAIYGRRKVPRKNIYKTVYPEYIILDEVLSANQINQDQLIGIGILVGTDFNEGIK
GIGAKKALALIKKEGDIKSVLKHIGKNIENLDEIIDFFKNPPVVDYDFKFRKPDTDAIEH
FLCDEHDFSRERIRDHLESLRKNDQASTQFRLDSFD
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgggaacagatatatcggatatagttgtgagccacgagacttctctcaaggatcagggc
aatcagacattctcgatagatacatacaacatactgtatcagttgctgagcaacgtaagg
cagtatgatgggatgccactgatggattcccacggcaatgtgacttcgcacctctacggc
atattctaccggacgatcaaccttctggaaaacaggataaggccggtatacgtgttcgac
ggaaagccaagcccactgaagaacaggactataagcgaacggcagatgatgaaggagaag
gcaaaggcagaactggaggaggcaatagagagaggcgaagaagatctaaggcagtactac
tctcgcataaattacataaccccgcagatagtcgatgacacgaagaaactccttgattac
atggggataccttacgtcgatgcaccatctgagggtgaggcccaggcctcctacatgacg
aagaagaatgtcgatggggtcatatcccaggactacgactgcctgctcttcggagcaaga
aagattctgcgaaacttcgcgatatacggccgcaggaaggttccaaggaagaatatatac
aagaccgtatacccggagtacataatactggatgaagtgctctctgcaaatcagataaac
caggatcagctgataggcataggtatactggtcggcaccgatttcaacgaggggataaag
ggaataggggcaaagaaggcccttgccctgataaagaaggaaggcgacattaagtctgtt
ttgaagcacataggcaagaacattgagaacctggacgagataatagacttcttcaagaat
cctccggtagtggactatgatttcaagttcagaaagccagatacggatgcaatagagcat
tttttgtgcgatgagcatgatttctcaagggagaggataagggatcacctggaatcgctg
agaaagaatgatcaggcgtcgacgcagttcaggctcgatagttttgattaa

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