Thermoplasma acidophilum: Ta1089
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Entry
Ta1089 CDS
T00037
Name
(GenBank) DNA-directed RNA polymerase, subunit E related protein
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
tac
Thermoplasma acidophilum
Pathway
tac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Ta1089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tac03021
]
Ta1089
Enzymes [BR:
tac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Ta1089
Transcription machinery [BR:
tac03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Ta1089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
RNase_II_C_S1
TRAM
Motif
Other DBs
NCBI-ProteinID:
CAC12217
UniProt:
Q9HJ82
LinkDB
All DBs
Position
1162409..1162978
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AA seq
189 aa
AA seq
DB search
MVEDKYIARVPPEMLGEDYDVAVREVTKRSLEGRLVDVINEKTSQNEGKYLVISVLYTES
IGEGTIVHGDGGVYQEVKYRALVYYPEMQEIVDGEVVSVQKFGAFIKFSSFEGLLHISQI
MDDRIDIDLENKRFIGKETKRDLKVGDRVRVRIVAMNLASSSISDSKIGFTMKQVGLGKL
DWLAKEASQ
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
ttggttgaggacaaatatatagccagggttccgcccgagatgctgggcgaggattatgat
gtcgcggtcagagaagtcaccaagagatctcttgaggggcgcctggtggacgtgatcaat
gagaaaacttcccagaatgaagggaaatacctggtcatatcggttctctatactgaatcg
ataggtgaaggtaccatagtccatggagatgggggcgtgtatcaggaggtcaaataccgt
gccctggtatattaccccgagatgcaggagatagttgacggtgaagttgtcagtgtacag
aaattcggcgcattcatcaaattttcctccttcgagggacttctgcacataagtcagata
atggatgaccgtatcgacatagatctggaaaacaagaggtttataggaaaggaaacgaag
agggatctcaaggttggggatcgcgtgcgtgtcaggatagtagcaatgaatcttgcgtca
tcatccatatcggacagcaagatcggcttcacaatgaagcaggtcggccttggaaagctg
gactggctggctaaggaggcgtcacaatga
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