KEGG   Thermoplasma acidophilum: Ta1294
Entry
Ta1294            CDS       T00037                                 
Name
(GenBank) rRNA processing protein (yeast RRP45) related protein
  KO
K12589  exosome complex component RRP42
Organism
tac  Thermoplasma acidophilum
Pathway
tac03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tac00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Ta1294
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tac03019]
    Ta1294
Messenger RNA biogenesis [BR:tac03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     Ta1294
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     Ta1294
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: CAC12416
UniProt: Q9HIP1
Structure
LinkDB
Position
1344814..1345536
AA seq 240 aa
MKGGKRIDGRLPDEFRELTIIENYIPRANGSAYVALGNTRVVAGVKIEAGEPFPDTPDQG
VLTTNVELLPIAFPSFEAGPPNDLAIEVSRVVDRGIRESKMISPEKLVIEQGKKVWIVFL
DINVLDYDGNLIDASTIAAVAALRNAVVPASKEGGEDFKLPVSSTPISVTMVKIGDTLVC
DPSLEEDQICGGRITVTTTEDGHIRAMQKGEIGAFTVEDVKKAVKMSLEVGKKLREKYFR
NT seq 723 nt   +upstreamnt  +downstreamnt
atgaagggcgggaagaggatcgatggaaggctgcccgacgaattcagagaattaacgatc
atagagaattacattcccagggcaaatggatccgcttatgtcgcccttggaaatacaaga
gttgttgctggtgtgaagatcgaggctggggagccattcccggacacaccggatcaggga
gtcctcacgacaaatgtggagctccttcccatagctttccccagctttgaagcggggcca
ccgaacgatctggcgatagaggtatcgcgcgttgtggacaggggcataagggaaagcaag
atgataagccctgaaaagctcgtgatcgagcagggaaagaaggtctggatagtatttctg
gacataaacgttcttgattatgatggaaacctcatagatgcaagtacaatcgctgctgtg
gctgctctgcgcaatgcggttgtccctgcatctaaggagggcggagaggatttcaaacta
cccgtatccagcaccccaatctccgtgaccatggtcaagataggggatacgcttgtctgc
gatcccagcctagaggaggatcagatatgcggcggcaggataacggtcacgacaaccgag
gatggccacatcagagcaatgcaaaaaggtgaaataggagctttcactgtcgaagatgtt
aaaaaggctgtcaagatgtcccttgaggttggtaagaagctaagggaaaaatacttcagg
tga

DBGET integrated database retrieval system