Thermoplasma acidophilum: Ta1425
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Entry
Ta1425 CDS
T00037
Name
(GenBank) probable transcription termination-antitermination factor related protein
KO
K15172
transcription elongation factor SPT5
Organism
tac
Thermoplasma acidophilum
Brite
KEGG Orthology (KO) [BR:
tac00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Ta1425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tac03021
]
Ta1425
03019 Messenger RNA biogenesis [BR:
tac03019
]
Ta1425
Transcription machinery [BR:
tac03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Ta1425
RNA polymerase I system
Ta1425
Messenger RNA biogenesis [BR:
tac03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Ta1425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
WxLIP_PGBD
KOW1_SPT5
Motif
Other DBs
NCBI-ProteinID:
CAC12545
UniProt:
Q9HIB6
LinkDB
All DBs
Position
complement(1473120..1474019)
Genome browser
AA seq
299 aa
AA seq
DB search
MFISRYLKVESMENSKEYEWISSDVPDRIEVGAGETINLRFSIKNIQNVKRKFRVSIGYS
VEENDSTVDWKAVLNISKKNEVSLLGQGSLEDDIDIDPLKSKNIDMAINAPKGAYPNDKM
TLNFSIESEDGVHRFTKSVTIVLKPVIVALKTTVGSEVQVAIDLNNRAEKDREDRSGDGK
KLPSEVYAIMAPYEIKGYIFVETMHPDRISYLARDIRGYKGMVSGKIDLEEIAHYLTPKP
AVSGLELGSLVELVEGPFKGEKAKIISIDSVKEEVTVQLVESMVPIPVTVKAESIRQLK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtttatttcaagataccttaaggtggaatccatggaaaacagcaaggaatatgaatgg
atatcgtctgacgttccagaccgcatagaggtcggtgctggcgaaacgatcaacctgcga
ttcagcataaagaacattcagaatgtgaagaggaagttcagggtcagcataggttacagc
gtcgaggagaacgacagcactgtggactggaaggccgtgctgaacatcagcaagaagaac
gaggtctcgctcctgggacagggcagtctggaggacgatatcgatatagatccgctcaag
tcaaagaatatcgatatggccataaatgcgccaaagggtgcgtatccaaacgataaaatg
acactgaatttttcaatagaatccgaggacggcgtgcacaggttcacaaagtccgtcacg
atcgtactgaagcccgttatcgttgcactcaagacgaccgttggatcagaggttcaggtc
gcgatagacctcaacaacagggcagagaaggacagggaggatcgatcaggagacggaaag
aagcttccaagcgaggtttatgccataatggctccgtacgaaataaagggctacatattc
gtggagaccatgcatcccgacaggatatcgtaccttgccagggatataaggggatacaag
ggcatggtgtctggcaagatagatctggaggagattgcgcattatctcacgccaaagcca
gccgtatccggcctggagctgggttcgctggtggagctcgttgaggggccgttcaagggg
gagaaggccaagataatatcgatagattccgtgaaggaggaagttaccgtgcagcttgtc
gagagcatggtaccaatacctgtcacggtgaaggccgaatccataaggcagctaaaatga
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integrated database retrieval system
