Thermodesulfobium acidiphilum: TDSAC_0009
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Entry
TDSAC_0009 CDS
T05396
Name
(GenBank) RNA polymerase sigma factor for flagellar operon FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
taci
Thermodesulfobium acidiphilum
Pathway
taci02020
Two-component system
taci02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
taci00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TDSAC_0009
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TDSAC_0009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taci03021
]
TDSAC_0009
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
taci02035
]
TDSAC_0009
Transcription machinery [BR:
taci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TDSAC_0009
Bacterial motility proteins [BR:
taci02035
]
Flagellar system
Flagellar assembly proteins
Stator
TDSAC_0009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
GerE
Sigma70_ECF
TnsD
HTH_23
HTH_WhiA
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
AWB09399
UniProt:
A0A2R4VXY5
LinkDB
All DBs
Position
10291..10962
Genome browser
AA seq
223 aa
AA seq
DB search
MIDEKALWIKYRNNSTQENRNLLALNYLPLVKRIAAKIYTSIQGKVEFEELLNYGILGLL
TSIERFEESRNLKFETFATHRIRGAILDGLRQIDPLKRGTRSKVKKIDKAISDLKVLLGK
DPNDKEVANYLNITQEELLSWYTEIDALSTFQGDFSNSENSYIDLSMAIETLSEREKQVV
DLYYYEDLSLDEIAKILNISISRVSQIHGKALIKLKSQLEGDK
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgatagacgagaaggctctctggataaagtatagaaacaattcaacccaggaaaatagg
aaccttcttgcccttaactatctgccgttagtaaaaagaattgctgcaaaaatatataca
agtatacaaggtaaagtagaatttgaagaacttttaaactatggaattttagggctgctt
acttcaattgaaagatttgaagaatctcgaaacctcaaatttgaaacctttgctacgcat
agaattagaggggcaattcttgacggtttaagacaaattgacccgttaaaaagaggaacg
cgttctaaagtaaagaaaatagataaagctatcagtgatttaaaagtattgcttggtaag
gacccaaatgacaaagaggttgctaattatttaaatataacccaggaagagttgctaagt
tggtatactgaaatagatgcactttcaacttttcaaggagatttttccaattcagaaaat
tcttatattgatctatcaatggctattgaaacgcttagcgaaagagaaaagcaagttgta
gatctatactattatgaagacttatctttggatgagattgcaaaaatcttaaatatatcg
atttcaagagtatctcaaattcacggtaaagctttaataaagttaaaatcccaactagag
ggggacaaatga
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