Entry |
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Name |
(GenBank) exonuclease SbcC
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KO |
K03546 | DNA repair protein SbcC/Rad50 |
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Organism |
taci Thermodesulfobium acidiphilum
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Brite |
KEGG Orthology (KO) [BR:taci00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:taci03400]
TDSAC_0078
DNA repair and recombination proteins [BR:taci03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TDSAC_0078
Archaeal homologous recombinant proteins
TDSAC_0078
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(74394..78023)
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AA seq |
1209 aa
MKILKIRLKNINSLYNEWTIDFTHPEFTSNSIFLITGQTGAGKSTILDAISLALYGRTPR
LGKISKNNNELMSRNTDECFSEVTFETQKGLYKALWWQKRTKELQHPKRELQEVKENKII
ETGTNKVEEKIIELTGMTYDQFTRSILLAQGDFASFLKANYDERSAILEQITGTQIYSEV
SIMVYEKRKTEREQLSLIKKELETLRILSPEEEGELRLQQDSYTLREKICNEELEKLSER
FNAKKKEKDISIEIKMLEKNLLDINKKLSDGNQQKLKLEKAKEARSIYPEYKELKNLEDS
LKDISRSLEKKEDEEKGLSKDLENLKKSLEEIKLKTQKFIEKKGKIEPLINEAKTIDLNI
QNLNKQEEIYKKLVNEVSKKKREILSQSDLTKQRIERIKREIKAFNLDLLENAYLEKLKD
ILPDLKSFLEMIKDLEVRLLSTEKILSSKEKEEESLTLEVQREYEKLDQKTREKESIELE
ITSIQKDIENLLSYKDINEIKKALDREKTKKPYLEILESIDLDIKERYAEFESLTTERER
LEREREQKEYEKKLIEDFLEANKKKFEELKLLKDFEKTREILEEGRPCPVCGSTHHPYKQ
MDNTLIDYSLIEEYNNKSENIKKLKDDISEISTKISLQENKLQNNAIQIKRLLSAKNESL
KKIEGIEKKFDYHVNITALNTEIEKNEIEINNLASLIERYEALENNINKKNKELLSLKED
ISSLKNIINSKEQKLNIIKAEVSNLQATREELNSQKHSQEKNISCILQKIGIKTVYPKEI
NNLYLDLKKRYEEFLKVKEFHIKYHSDLENEEKNLNKLQFDLENIEEEIKKYQEEFNKIT
SDIKNLEEKRYKTLRNYDTDLCEKKLREIKEGLEKRLQDNQSALNNLENTRSFLNGEIEN
TKKKKLEMEELYKLKKYEFESLLREHNFIDIENFEASLISDEEIAIISKELKAIEIEREL
LDSKVSEKRRELEQIKELIGKNNQTLEETFKDLEFQREKVKNIRENIGMLKQKLSANNEV
KEKYNKLIKEIEMKEKNLKKYDILYDLIGSSDGKKFRSFAQEITFDILIKHANRHLKRIS
DRYILTKDKKERLCFSVIDNYQAGEIRSTKNLSGGESFIVSLALALGLSSMSSKNVRVDS
LFLDEGFGTLDEETLETALNAISNLNQENKTIGIISHLTYIQERIATQIKVISKPGGKSI
IVGPGVSKS |
NT seq |
3630 nt +upstreamnt +downstreamnt
atgaagattcttaaaataaggctaaagaatataaattcactttacaacgaatggactata
gactttacccatcctgaattcacatcaaattctatatttttaattactgggcaaactggc
gctggaaaatctactatattggatgccatttcgcttgctttatacggtagaactccaaga
ctaggcaaaatctccaaaaataataacgagttaatgtcaagaaacactgatgaatgcttt
tctgaggttactttcgaaacacaaaagggattgtataaagccctatggtggcaaaaaaga
accaaagagttacaacatccaaaaagagagttacaagaggttaaagaaaacaaaatcata
gaaacaggaacaaacaaagtagaagaaaaaataattgaacttacagggatgacatacgat
cagtttacaaggtctatccttctggcacagggtgactttgcatcttttttaaaagccaat
tatgatgaaagatcagcaattcttgaacaaatcactggtacacagatttacagtgaggta
tctataatggtttacgaaaaaagaaagacagaaagagaacagttaagtttaataaaaaaa
gaacttgaaactcttagaatattaagccccgaagaagaaggagaactaagacttcagcaa
gattcttataccctacgagaaaagatttgtaatgaagaactcgaaaaattaagtgaaagg
tttaacgctaaaaagaaggaaaaggatatatcaatcgaaataaaaatgttagaaaaaaac
cttttagacataaacaaaaagctttcagatggtaatcaacaaaaattaaaactagagaaa
gccaaagaagcaaggagcatctatcctgaatacaaagaactaaagaatttggaagattcg
ctaaaagatataagtcgttctttagaaaaaaaagaagatgaagaaaaaggcttaagtaaa
gatttagaaaatttaaaaaaaagtttagaagaaataaagctaaaaacgcaaaaatttata
gaaaaaaaagggaaaatagaacctcttataaacgaggcaaagacaattgacttgaatata
caaaacttaaataaacaagaagaaatatacaaaaaattagttaacgaagtctcgaaaaag
aaaagggaaatattaagtcaaagtgatttaacaaaacaaagaatagaaagaattaaaaga
gaaataaaagcatttaacctagatttattagaaaatgcttaccttgagaaattaaaagat
atccttcctgatttaaaaagttttctcgaaatgataaaggatttagaagtcaggcttctt
agtacagaaaaaattttgtcatctaaggagaaagaagaagaaagtctaacccttgaagtg
caaagagaatatgaaaaattagatcaaaaaacacgagaaaaagaaagtattgaattagaa
ataacatctattcaaaaggatatagagaacttgctttcatataaagacatcaacgagata
aaaaaggcactcgacagggaaaaaacaaaaaaaccatatcttgaaatattagaaagcata
gatctagatatcaaagaaaggtatgctgaatttgaatctttaacaacagaaagggaaaga
ttagaaagggaaagagagcaaaaggaatacgaaaagaaattaattgaagattttttagaa
gcgaataaaaagaaatttgaagaacttaaacttctaaaagattttgaaaagacaagagaa
atattggaagaaggcagaccctgtccggtctgtggatctactcatcatccttacaaacaa
atggataataccctaatcgattactctctaattgaagagtataacaacaagtcagaaaat
ataaaaaagctcaaagatgatatctctgaaataagtaccaaaattagtttgcaagaaaat
aaacttcaaaacaatgctattcaaataaaaaggttgctaagcgccaaaaatgagtctctt
aaaaagattgaaggaattgaaaaaaaatttgactaccatgtgaacattacagccctaaat
acagaaattgaaaaaaatgaaatcgaaataaataatttagccagtctaattgaaagatat
gaggctttagaaaataatataaataaaaagaataaagaacttttatctttaaaagaagat
atcagctcgctaaaaaatattattaattctaaagagcaaaaactcaacatcataaaggct
gaggtctcaaatttacaagccacaagggaagaattgaatagtcaaaagcattctcaagaa
aaaaatatttcatgtattttgcaaaaaattggcattaaaacagtttatcccaaagagata
aataacctatacttagatctcaaaaaaagatatgaagagtttttaaaagttaaagaattt
catataaaatatcactcagacctagaaaatgaagaaaaaaatttaaacaaattacagttt
gatttagaaaatattgaagaagaaattaaaaaatatcaagaagaattcaataaaattact
tcagatataaaaaatttagaagaaaaaagatacaaaactcttagaaattacgataccgat
ctatgcgaaaaaaaattaagggaaattaaagaaggcttagaaaaaaggttgcaagataat
caaagtgccctcaacaacctagaaaataccagatcgtttctaaacggagaaattgaaaat
acaaagaagaaaaagcttgaaatggaagaattgtataagcttaaaaaatatgaatttgag
agtctcttaagagaacataattttatagatatagaaaatttcgaagcgtcactaatttcg
gatgaagagattgcgattatatccaaggagcttaaagctatagagatagaaagggagtta
cttgattcaaaggtatctgaaaagagaagggagctagagcaaataaaagagctaattgga
aaaaacaaccaaactctggaagaaacgtttaaagacttagagtttcaaagggaaaaagta
aaaaatatcagagaaaatattggaatgttgaagcaaaaattaagtgcaaataacgaagta
aaagaaaaatataacaaattaataaaagaaatagaaatgaaggaaaaaaatttaaaaaag
tatgatatattatatgatcttatcggatcatccgatggaaaaaaatttaggagctttgct
caggaaatcacatttgacatattgataaaacacgcaaacaggcacttaaaaagaattagt
gatagatatattcttacaaaggataaaaaagagaggctttgtttttccgtaatagataac
taccaagcaggagaaattagaagcacaaaaaatttatctggtggagaaagcttcattgta
agccttgccctagcgcttggtctatcttctatgtcaagcaaaaatgtcagagtagattca
ctgtttctcgacgagggctttggtacattagacgaggaaaccttagaaacagcgcttaat
gcaatatctaatttaaatcaagaaaacaagacaataggaataatatcccaccttacatat
atacaggaaagaattgctactcaaataaaagttatatcaaaacctggcgggaaaagtata
attgtaggccctggagttagtaaatcctga |