Thermodesulfobium acidiphilum: TDSAC_0078
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Entry
TDSAC_0078 CDS
T05396
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
taci
Thermodesulfobium acidiphilum
Brite
KEGG Orthology (KO) [BR:
taci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taci03400
]
TDSAC_0078
DNA repair and recombination proteins [BR:
taci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TDSAC_0078
Archaeal homologous recombinant proteins
TDSAC_0078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
SMC_N
AAA_22
AAA_16
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AWB09468
UniProt:
A0A2R4VYA4
LinkDB
All DBs
Position
complement(74394..78023)
Genome browser
AA seq
1209 aa
AA seq
DB search
MKILKIRLKNINSLYNEWTIDFTHPEFTSNSIFLITGQTGAGKSTILDAISLALYGRTPR
LGKISKNNNELMSRNTDECFSEVTFETQKGLYKALWWQKRTKELQHPKRELQEVKENKII
ETGTNKVEEKIIELTGMTYDQFTRSILLAQGDFASFLKANYDERSAILEQITGTQIYSEV
SIMVYEKRKTEREQLSLIKKELETLRILSPEEEGELRLQQDSYTLREKICNEELEKLSER
FNAKKKEKDISIEIKMLEKNLLDINKKLSDGNQQKLKLEKAKEARSIYPEYKELKNLEDS
LKDISRSLEKKEDEEKGLSKDLENLKKSLEEIKLKTQKFIEKKGKIEPLINEAKTIDLNI
QNLNKQEEIYKKLVNEVSKKKREILSQSDLTKQRIERIKREIKAFNLDLLENAYLEKLKD
ILPDLKSFLEMIKDLEVRLLSTEKILSSKEKEEESLTLEVQREYEKLDQKTREKESIELE
ITSIQKDIENLLSYKDINEIKKALDREKTKKPYLEILESIDLDIKERYAEFESLTTERER
LEREREQKEYEKKLIEDFLEANKKKFEELKLLKDFEKTREILEEGRPCPVCGSTHHPYKQ
MDNTLIDYSLIEEYNNKSENIKKLKDDISEISTKISLQENKLQNNAIQIKRLLSAKNESL
KKIEGIEKKFDYHVNITALNTEIEKNEIEINNLASLIERYEALENNINKKNKELLSLKED
ISSLKNIINSKEQKLNIIKAEVSNLQATREELNSQKHSQEKNISCILQKIGIKTVYPKEI
NNLYLDLKKRYEEFLKVKEFHIKYHSDLENEEKNLNKLQFDLENIEEEIKKYQEEFNKIT
SDIKNLEEKRYKTLRNYDTDLCEKKLREIKEGLEKRLQDNQSALNNLENTRSFLNGEIEN
TKKKKLEMEELYKLKKYEFESLLREHNFIDIENFEASLISDEEIAIISKELKAIEIEREL
LDSKVSEKRRELEQIKELIGKNNQTLEETFKDLEFQREKVKNIRENIGMLKQKLSANNEV
KEKYNKLIKEIEMKEKNLKKYDILYDLIGSSDGKKFRSFAQEITFDILIKHANRHLKRIS
DRYILTKDKKERLCFSVIDNYQAGEIRSTKNLSGGESFIVSLALALGLSSMSSKNVRVDS
LFLDEGFGTLDEETLETALNAISNLNQENKTIGIISHLTYIQERIATQIKVISKPGGKSI
IVGPGVSKS
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcttaaaataaggctaaagaatataaattcactttacaacgaatggactata
gactttacccatcctgaattcacatcaaattctatatttttaattactgggcaaactggc
gctggaaaatctactatattggatgccatttcgcttgctttatacggtagaactccaaga
ctaggcaaaatctccaaaaataataacgagttaatgtcaagaaacactgatgaatgcttt
tctgaggttactttcgaaacacaaaagggattgtataaagccctatggtggcaaaaaaga
accaaagagttacaacatccaaaaagagagttacaagaggttaaagaaaacaaaatcata
gaaacaggaacaaacaaagtagaagaaaaaataattgaacttacagggatgacatacgat
cagtttacaaggtctatccttctggcacagggtgactttgcatcttttttaaaagccaat
tatgatgaaagatcagcaattcttgaacaaatcactggtacacagatttacagtgaggta
tctataatggtttacgaaaaaagaaagacagaaagagaacagttaagtttaataaaaaaa
gaacttgaaactcttagaatattaagccccgaagaagaaggagaactaagacttcagcaa
gattcttataccctacgagaaaagatttgtaatgaagaactcgaaaaattaagtgaaagg
tttaacgctaaaaagaaggaaaaggatatatcaatcgaaataaaaatgttagaaaaaaac
cttttagacataaacaaaaagctttcagatggtaatcaacaaaaattaaaactagagaaa
gccaaagaagcaaggagcatctatcctgaatacaaagaactaaagaatttggaagattcg
ctaaaagatataagtcgttctttagaaaaaaaagaagatgaagaaaaaggcttaagtaaa
gatttagaaaatttaaaaaaaagtttagaagaaataaagctaaaaacgcaaaaatttata
gaaaaaaaagggaaaatagaacctcttataaacgaggcaaagacaattgacttgaatata
caaaacttaaataaacaagaagaaatatacaaaaaattagttaacgaagtctcgaaaaag
aaaagggaaatattaagtcaaagtgatttaacaaaacaaagaatagaaagaattaaaaga
gaaataaaagcatttaacctagatttattagaaaatgcttaccttgagaaattaaaagat
atccttcctgatttaaaaagttttctcgaaatgataaaggatttagaagtcaggcttctt
agtacagaaaaaattttgtcatctaaggagaaagaagaagaaagtctaacccttgaagtg
caaagagaatatgaaaaattagatcaaaaaacacgagaaaaagaaagtattgaattagaa
ataacatctattcaaaaggatatagagaacttgctttcatataaagacatcaacgagata
aaaaaggcactcgacagggaaaaaacaaaaaaaccatatcttgaaatattagaaagcata
gatctagatatcaaagaaaggtatgctgaatttgaatctttaacaacagaaagggaaaga
ttagaaagggaaagagagcaaaaggaatacgaaaagaaattaattgaagattttttagaa
gcgaataaaaagaaatttgaagaacttaaacttctaaaagattttgaaaagacaagagaa
atattggaagaaggcagaccctgtccggtctgtggatctactcatcatccttacaaacaa
atggataataccctaatcgattactctctaattgaagagtataacaacaagtcagaaaat
ataaaaaagctcaaagatgatatctctgaaataagtaccaaaattagtttgcaagaaaat
aaacttcaaaacaatgctattcaaataaaaaggttgctaagcgccaaaaatgagtctctt
aaaaagattgaaggaattgaaaaaaaatttgactaccatgtgaacattacagccctaaat
acagaaattgaaaaaaatgaaatcgaaataaataatttagccagtctaattgaaagatat
gaggctttagaaaataatataaataaaaagaataaagaacttttatctttaaaagaagat
atcagctcgctaaaaaatattattaattctaaagagcaaaaactcaacatcataaaggct
gaggtctcaaatttacaagccacaagggaagaattgaatagtcaaaagcattctcaagaa
aaaaatatttcatgtattttgcaaaaaattggcattaaaacagtttatcccaaagagata
aataacctatacttagatctcaaaaaaagatatgaagagtttttaaaagttaaagaattt
catataaaatatcactcagacctagaaaatgaagaaaaaaatttaaacaaattacagttt
gatttagaaaatattgaagaagaaattaaaaaatatcaagaagaattcaataaaattact
tcagatataaaaaatttagaagaaaaaagatacaaaactcttagaaattacgataccgat
ctatgcgaaaaaaaattaagggaaattaaagaaggcttagaaaaaaggttgcaagataat
caaagtgccctcaacaacctagaaaataccagatcgtttctaaacggagaaattgaaaat
acaaagaagaaaaagcttgaaatggaagaattgtataagcttaaaaaatatgaatttgag
agtctcttaagagaacataattttatagatatagaaaatttcgaagcgtcactaatttcg
gatgaagagattgcgattatatccaaggagcttaaagctatagagatagaaagggagtta
cttgattcaaaggtatctgaaaagagaagggagctagagcaaataaaagagctaattgga
aaaaacaaccaaactctggaagaaacgtttaaagacttagagtttcaaagggaaaaagta
aaaaatatcagagaaaatattggaatgttgaagcaaaaattaagtgcaaataacgaagta
aaagaaaaatataacaaattaataaaagaaatagaaatgaaggaaaaaaatttaaaaaag
tatgatatattatatgatcttatcggatcatccgatggaaaaaaatttaggagctttgct
caggaaatcacatttgacatattgataaaacacgcaaacaggcacttaaaaagaattagt
gatagatatattcttacaaaggataaaaaagagaggctttgtttttccgtaatagataac
taccaagcaggagaaattagaagcacaaaaaatttatctggtggagaaagcttcattgta
agccttgccctagcgcttggtctatcttctatgtcaagcaaaaatgtcagagtagattca
ctgtttctcgacgagggctttggtacattagacgaggaaaccttagaaacagcgcttaat
gcaatatctaatttaaatcaagaaaacaagacaataggaataatatcccaccttacatat
atacaggaaagaattgctactcaaataaaagttatatcaaaacctggcgggaaaagtata
attgtaggccctggagttagtaaatcctga
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