Thermodesulfobium acidiphilum: TDSAC_0140
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Entry
TDSAC_0140 CDS
T05396
Name
(GenBank) ribonucrease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
taci
Thermodesulfobium acidiphilum
Pathway
taci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TDSAC_0140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taci03019
]
TDSAC_0140
Messenger RNA biogenesis [BR:
taci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TDSAC_0140
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
DUF1310
KH-I_KHDC4-BBP
DUF3149
DUF3139
Chordopox_G3
Motif
Other DBs
NCBI-ProteinID:
AWB09527
UniProt:
A0A2R4VYC3
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Position
139058..140605
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AA seq
515 aa
AA seq
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MEHGLLTIILIILIIIGVAVIFYLYKKTKELRLEAEKLSREAKEVLQNNIKEAENKKREI
LLEAKDEAIRLKSEAEREIKERRIEINRLEQRLLRKEENLERKLENLEKKEEQINLKKLQ
IDELKAKLEGLIQEKMIEIERISGLTSEEARNILLAEVEKELDVEIANKVKEAQMKIKEE
SEKKSREILSLAIQRCAVDHTMESTVSVITLPNDDMKGRIIGREGRNIRSFEAETGVELI
IDDTPEAVTISSFDPIRREIARRSLEKLILDGRIHPGRIEETVEKSRRELEQEIKEYGET
VCLEMGIANFHPEIVRLIGRLKFRTSYGQNIYQHSVEVAHLAGIMASELGLDAALAKRGG
LLHDIGKAVDFEMEGSHALIGADLAKRYKESPIVVNMIAAHHGEVEPISLEAILVQAADA
VSASRPGARRESLETYIKRLENLEKIALSFEGIDKCFAIQAGREIRVMVKPDQIDDIMTQ
KLARDIAKQIEESLDYPGEIKVCVVREIRSVEYAK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
gtggaacatggtcttttaacgattattttaataatacttataataattggcgttgctgtt
atattttatttatataaaaaaactaaggagttaagattagaggcagaaaagcttagtaga
gaagctaaagaagttcttcaaaacaacattaaggaagccgaaaacaagaaaagagaaata
cttcttgaggcgaaagatgaggctataaggttaaagtctgaagcagaaagagagataaag
gaaagaagaattgaaataaataggcttgagcaaaggcttttgcgtaaagaagaaaacctt
gaaagaaaacttgaaaatcttgaaaaaaaagaggagcagataaatctaaaaaaacttcag
atagatgaattgaaggcaaaacttgaaggccttatacaagaaaagatgatcgaaattgag
agaatatcaggccttacatctgaagaggcacgaaatatattgcttgctgaagtagaaaag
gagcttgacgttgagatagcaaacaaagttaaagaagcccagatgaagatcaaagaagaa
tccgaaaaaaagtcaagggaaatattatctcttgctatccagagatgtgctgttgatcac
actatggagtcaactgtttctgtaattaccttgccaaacgatgatatgaagggaaggatt
atcggaagagaagggagaaacatacgctcttttgaagctgaaacgggagtagaactaata
attgatgacacgcctgaagcagttacaatttctagttttgatcctataaggagagaaatt
gcaaggagatctttggaaaaacttatattagatggtagaatccaccctggaagaattgaa
gaaactgttgagaaatccagaagagagctagaacaagaaataaaggaatacggtgaaaca
gtttgtcttgagatgggcatagcaaactttcatcctgaaattgtaaggcttataggtaga
ctaaagtttaggaccagttatggccaaaacatatatcaacattctgtagaagttgctcac
cttgctgggataatggcatctgaacttggacttgatgcagctctggcaaagagaggtgga
ttgcttcacgatattggtaaagcggtagatttcgaaatggaaggttctcatgcccttatt
ggtgcagaccttgcaaaaagatacaaagagagccctatagtagtaaatatgattgcagca
catcacggtgaggtggaaccgataagtcttgaggctattcttgttcaggctgctgatgct
gtttctgcgtccaggccaggagcaagaagagaatcccttgagacttatataaagagatta
gaaaaccttgaaaagattgcgctttcgtttgaagggatagataagtgttttgcgatacag
gcaggcagagaaataagggttatggtaaagccagatcagattgatgatattatgacacaa
aagcttgcaagggatatagcaaaacaaatagaagaatcattagattatccaggagaaatt
aaagtttgcgtggtgagagaaattagatcggttgaatacgctaaatga
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