KEGG   Thermodesulfobium acidiphilum: TDSAC_0571
Entry
TDSAC_0571        CDS       T05396                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
taci  Thermodesulfobium acidiphilum
Pathway
taci03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:taci00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TDSAC_0571
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:taci03019]
    TDSAC_0571
Messenger RNA biogenesis [BR:taci03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     TDSAC_0571
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B Lactamase_B_2 RMMBL RNase_J_C Anti-Pycsar_Apyc1 Lactamase_B_6
Other DBs
NCBI-ProteinID: AWB09945
UniProt: A0A2R4VZG7
LinkDB
Position
complement(540501..542099)
AA seq 532 aa
MTLFESERSLIVLDCGIKFPDPSFESSLLTADFQYVIEKKDKVKALFITHGHEDHIGAIP
FLLKKVNIPIYGTKLTLGMVRAKLRDYKISPKDITFHEINSNEIIFVDDMFVESFHVNHS
IPDGVGYAIHTPHGTIIHSGDFKFDQTPIDRKTTEYSKLVSISSKGIDLLILDITNVERE
GFTPSERVVGEKFFDVFRKVNGRIILTTFASNIHRVQQAINASIAFDRKFCILGKSMVNT
VSIAKELGYLSFPEEFQLKQHELKNQPLEKTTIITTGSQGEPLSVLTRIANNNHKDVKIF
PNDTVIISASPIPGNETLVNKTINKLFKLGAEVLYEPNHKVHVSGHGSKEDIKLLINLVK
PKNLLPFHGEFRHMKHFSDLAQNLNYSEKNIILAKNGAVVELNNGEVKIVDEIAIRNMIA
SGSEIIEFNKSSFLERKKLLEEGLILISLTFDPERFKILAEPRIKTLGLKNHDNIIQKEI
ESAIYSFFLKSPKIENTQKLEDKISNSIKELVFSQYRKYPAIFVQAIALNIK
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgacactttttgaaagcgaaaggtctcttattgtacttgattgtggaataaaattcccc
gatccaagtttcgaatcctctcttttaacggctgatttccaatacgtaattgaaaaaaaa
gataaggtaaaggccctcttcatcacacatgggcatgaagatcatattggtgcaattcca
tttcttttaaaaaaagtaaacatacctatatacggaaccaaattaactctcggaatggta
agggcaaagttaagagattataaaatatccccaaaggatataacttttcatgaaattaat
tcaaatgaaattatttttgttgacgatatgtttgttgaatcctttcacgtcaaccatagt
attcctgacggagtaggatatgctattcataccccacatggaacaataattcattctggc
gatttcaaattcgatcaaactccaatagatagaaaaacaacagaatacagcaaactagta
tcaattagttcaaagggcatagacctcctgatacttgacattacaaacgttgagagagaa
ggttttacaccatctgaaagggtagtaggagaaaaattttttgatgtattcaggaaagta
aatggaagaataattcttacaacttttgcttcaaatatccatagagtacaacaagcaatt
aacgcgtcaatcgcttttgacagaaaattttgtattcttggtaaaagcatggtaaatact
gtatcaatagcaaaagaactagggtatttatcctttcctgaagagtttcagttaaagcag
catgaattgaaaaatcagccacttgaaaaaaccacaataatcacaacaggaagtcaaggt
gaacctctttcagttctaacaagaatagcaaataacaatcataaagacgttaaaatcttt
ccaaatgacactgttattatttcagcatcaccaattccaggcaatgaaactctcgtcaac
aagaccataaataaactatttaagttgggagctgaagttttatacgaaccaaatcacaag
gtgcatgtatcaggacacggttctaaagaagatataaagctcctcataaatttagtaaaa
ccaaaaaatctcttaccatttcacggcgaatttagacatatgaagcatttttctgatctt
gcccaaaatcttaattactctgaaaaaaatatcatattggcaaaaaatggagcagtcgtt
gagttgaataatggagaagttaaaatagttgatgaaatcgcaattagaaatatgattgca
agcggttcagaaataattgaatttaataaaagttctttccttgaaagaaaaaaattatta
gaagaagggttaattttgatatcattaacatttgatccagaaaggttcaaaatattagcc
gaaccaagaataaagacattaggtttgaaaaatcatgataatattattcaaaaagaaatt
gaatcggcaatatattctttctttttaaagagtccaaaaatagaaaatactcaaaaactt
gaagataaaatctctaattcaataaaagaattagttttcagtcaatataggaaataccca
gctatttttgtacaggccattgcgctaaatattaaatag

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