Thermodesulfobium acidiphilum: TDSAC_0571
Help
Entry
TDSAC_0571 CDS
T05396
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
taci
Thermodesulfobium acidiphilum
Pathway
taci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TDSAC_0571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taci03019
]
TDSAC_0571
Messenger RNA biogenesis [BR:
taci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TDSAC_0571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
RNase_J_C
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AWB09945
UniProt:
A0A2R4VZG7
LinkDB
All DBs
Position
complement(540501..542099)
Genome browser
AA seq
532 aa
AA seq
DB search
MTLFESERSLIVLDCGIKFPDPSFESSLLTADFQYVIEKKDKVKALFITHGHEDHIGAIP
FLLKKVNIPIYGTKLTLGMVRAKLRDYKISPKDITFHEINSNEIIFVDDMFVESFHVNHS
IPDGVGYAIHTPHGTIIHSGDFKFDQTPIDRKTTEYSKLVSISSKGIDLLILDITNVERE
GFTPSERVVGEKFFDVFRKVNGRIILTTFASNIHRVQQAINASIAFDRKFCILGKSMVNT
VSIAKELGYLSFPEEFQLKQHELKNQPLEKTTIITTGSQGEPLSVLTRIANNNHKDVKIF
PNDTVIISASPIPGNETLVNKTINKLFKLGAEVLYEPNHKVHVSGHGSKEDIKLLINLVK
PKNLLPFHGEFRHMKHFSDLAQNLNYSEKNIILAKNGAVVELNNGEVKIVDEIAIRNMIA
SGSEIIEFNKSSFLERKKLLEEGLILISLTFDPERFKILAEPRIKTLGLKNHDNIIQKEI
ESAIYSFFLKSPKIENTQKLEDKISNSIKELVFSQYRKYPAIFVQAIALNIK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacactttttgaaagcgaaaggtctcttattgtacttgattgtggaataaaattcccc
gatccaagtttcgaatcctctcttttaacggctgatttccaatacgtaattgaaaaaaaa
gataaggtaaaggccctcttcatcacacatgggcatgaagatcatattggtgcaattcca
tttcttttaaaaaaagtaaacatacctatatacggaaccaaattaactctcggaatggta
agggcaaagttaagagattataaaatatccccaaaggatataacttttcatgaaattaat
tcaaatgaaattatttttgttgacgatatgtttgttgaatcctttcacgtcaaccatagt
attcctgacggagtaggatatgctattcataccccacatggaacaataattcattctggc
gatttcaaattcgatcaaactccaatagatagaaaaacaacagaatacagcaaactagta
tcaattagttcaaagggcatagacctcctgatacttgacattacaaacgttgagagagaa
ggttttacaccatctgaaagggtagtaggagaaaaattttttgatgtattcaggaaagta
aatggaagaataattcttacaacttttgcttcaaatatccatagagtacaacaagcaatt
aacgcgtcaatcgcttttgacagaaaattttgtattcttggtaaaagcatggtaaatact
gtatcaatagcaaaagaactagggtatttatcctttcctgaagagtttcagttaaagcag
catgaattgaaaaatcagccacttgaaaaaaccacaataatcacaacaggaagtcaaggt
gaacctctttcagttctaacaagaatagcaaataacaatcataaagacgttaaaatcttt
ccaaatgacactgttattatttcagcatcaccaattccaggcaatgaaactctcgtcaac
aagaccataaataaactatttaagttgggagctgaagttttatacgaaccaaatcacaag
gtgcatgtatcaggacacggttctaaagaagatataaagctcctcataaatttagtaaaa
ccaaaaaatctcttaccatttcacggcgaatttagacatatgaagcatttttctgatctt
gcccaaaatcttaattactctgaaaaaaatatcatattggcaaaaaatggagcagtcgtt
gagttgaataatggagaagttaaaatagttgatgaaatcgcaattagaaatatgattgca
agcggttcagaaataattgaatttaataaaagttctttccttgaaagaaaaaaattatta
gaagaagggttaattttgatatcattaacatttgatccagaaaggttcaaaatattagcc
gaaccaagaataaagacattaggtttgaaaaatcatgataatattattcaaaaagaaatt
gaatcggcaatatattctttctttttaaagagtccaaaaatagaaaatactcaaaaactt
gaagataaaatctctaattcaataaaagaattagttttcagtcaatataggaaataccca
gctatttttgtacaggccattgcgctaaatattaaatag
DBGET
integrated database retrieval system