Thermodesulfobium acidiphilum: TDSAC_1272
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Entry
TDSAC_1272 CDS
T05396
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
taci
Thermodesulfobium acidiphilum
Pathway
taci03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
taci00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TDSAC_1272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taci03021
]
TDSAC_1272
03400 DNA repair and recombination proteins [BR:
taci03400
]
TDSAC_1272
Enzymes [BR:
taci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TDSAC_1272
Transcription machinery [BR:
taci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TDSAC_1272
DNA repair and recombination proteins [BR:
taci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TDSAC_1272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AWB10614
UniProt:
A0A2R4W1K0
LinkDB
All DBs
Position
complement(1250228..1254673)
Genome browser
AA seq
1481 aa
AA seq
DB search
MEPFVEISEDNKQVKDKTSSKLVAIKIGLASSERIRSWSRGEVKKPETINYRTLRPERGG
LFCEKIFGPTKDYECYCGKYKRPRYKGTICDRCGVEVTSSKVRRLRMGHIDLAAPVAHIW
YFKGTTSYIGSVLDISNKEVEEVIYFSRYLILDPKDSGLQKFKTLSEDEYEYWVKQLGRS
AIEVEHLSDDNYQVVDPKNTFLEAGRILTADEYEYYTYSFGQNYFVAKMGAEAIKEALES
INVEELSNQIKEEMISTSFQSPKRLKMIKRFRVLEFFRKSGANPAWMVLEAIPVIPPDLR
PMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDMGAPEIIVRNEKRMLQEAVDALFDNE
RRLKPVTGTHDRPLRSLSDIIEGKQGRFRQNLLGKRVDYSGRSVIVVGPTLKLHQCGLPK
EMALELFKPFVIHELIKRGLTGNVKGAKRKIERGENVIWDILAEVIQGHPVFLNRAPTLH
RLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQAEARVLMLSSHNL
LSPANGQPLVTPSQDMVLGLHYLTSFEKNPTFRSEEDAIDAFKKGEIDETQKIDVYCERV
NGYLTTCVKKIQTGQPFLFFIDKNDAITRYQIDSVKPPHEFSLSLIDRIAVKIDKEFLAT
SVGQILFNEILPGKWPYYREPLTKKRIAKIVRQCYEDFGLTRTVKLVDDLKDIGFKYAKE
SGISISIDDLVVPAEKKEIIKRAEEEIKRFDEFVSEGTMTQEEKDAKVREKWNMITDEIK
DRMNSSMGERNPVFMMANSGARGNIDQVRQLAAMRGLMSDPHGRIIPIPIKANLKEGMNM
MEYFISTYGARKGLVDTALRTSNSGYLTRRLVDVAQEIIVREEDCGSEESIVVSDLMDGT
KVILELKDRIIGRFSAEDIYDADGKLIVKRNELITPSIADKIVDAGIKEVAVRSPLTCKT
PHGVCQKCYGWSLATREVVELGEAVGIIAAQSIGEPGTQLTMRTFHTGGVALHRSKNIER
SKISGTVKFESLKTFTFLNDNIETTIAISEGNIVIKGETSVKVFVNRGMLLHVKDGSFVK
ENDVLVEEDEDNEYLIAEKGNIVFYTMPVEERVISENNVISIASQNGEVLFTKEKPIIIK
VNANLDIKIKDREKVVPGKEIAEGITSPVLGMAVIPKFEPVLDSETGEMVTPIYIYQGDF
ASCNKNSRLFVKDSTMLTNTTLVAISPKSKESAIKTKDIIQGLPRVEELFEARRPKNAAI
LSEIDGIVHIISNSDTDPIKIIIEGLEETKEIVVPASTQLQVSDGAFIKKGYPLTEGQFY
PQELLKTRGIDAVKQYIVDEIQKVYKDQSVSIHDKHIEIIVRQMTKRVKIKNDGDSDWLP
GEYVDRGEFEKVVKELTLQGKTPPEAEDAVLGITKSSLNTSSFIAAASFQETTRILTEAS
IRGKIDYLRGLKENVVIGRLIPAGTGFDLYESYDYVKVGDK
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
ttggaaccctttgttgaaattagtgaagataacaaacaggttaaggataaaacttcttct
aaacttgtggctataaagattgggcttgcgtcaagcgaaaggataagatcgtggtcaaga
ggagaagtaaaaaagcctgaaactattaattatagaacgttaaggcctgaaagaggcggt
ctcttttgtgaaaagatatttggacccacgaaagattatgaatgttattgtggcaaatat
aagcgaccaagatataaaggaacgatttgtgatagatgcggagttgaggttacttcgtcg
aaggtaagaagattaagaatggggcacattgatctggcagctcctgttgctcatatttgg
tatttcaaaggcactacgagctacataggttctgttttagatatttcaaacaaagaagtt
gaagaagtaatatatttttcaagatatttaattttagatcctaaagatagtggattacaa
aaatttaaaacgctttccgaagatgaatacgaatactgggtaaaacaacttggtagatcg
gcaattgaggtggaacatttaagtgatgataattatcaagttgtagatcctaaaaacact
tttctcgaagcaggtagaattttgactgctgatgaatatgaatattatacatatagcttt
ggtcaaaactattttgtagcaaaaatgggtgctgaagctattaaagaggcattagagtct
attaacgttgaagaattgagtaatcagattaaagaagaaatgatttcaacatcttttcaa
agtccaaaaaggctaaaaatgataaaaagattcagggttttggaattttttagaaaatcg
ggtgctaatcctgcctggatggttttggaggccatacctgttattccgcctgatcttaga
cccatggttcaattagatggtgggagatttgctacttcggacttaaacgatctttataga
agggttattaatagaaataatagattaaagaaactacttgatatgggtgctcctgaaatt
attgttagaaatgaaaaaagaatgcttcaagaagcagtggatgcactctttgataacgaa
agaagattaaagcccgtaacggggacccatgacagacctcttaggtctctttctgatatc
attgaagggaaacaaggacgatttagacagaatttgttggggaaaagggtggattattct
ggacgttcagtaattgttgtgggtcctacacttaaacttcatcaatgtggattgccgaaa
gaaatggctttagaactttttaagccttttgtaattcacgaacttattaaaagaggatta
actggaaatgtaaaaggagctaaaagaaaaatagaacggggcgaaaatgttatatgggat
attcttgctgaagttatacagggacaccctgtttttctgaatcgtgctcctacgcttcac
aggctaggaattcaagcttttgaaccagttttgatagaaggcaaagccattcaacttcat
cctctggtttgtgctgcttttaatgcagactttgatggagatcaaatggctgttcacgtt
ccactatctcttgaggcacaagctgaggcaagagtattaatgctttcaagtcataattta
ttgtctcctgctaatggtcaaccattggtaactccttcacaggatatggttttagggctt
cattatcttacaagttttgaaaaaaatcctacttttagaagcgaagaagatgctatagac
gcttttaagaagggtgaaattgatgaaacccaaaaaatagacgtttattgcgaaagagtt
aatggttatctgacaacttgtgttaaaaaaatacaaactggacaaccgtttttgtttttt
atagacaaaaatgatgctattacaaggtatcaaattgatagtgtaaaaccaccacatgaa
ttctcgcttagtcttattgatagaattgctgtgaaaattgataaggaatttttagctact
agtgtaggtcaaatattatttaatgaaattttgcctggtaagtggccttattatagggaa
ccgctgacaaagaagagaattgcaaagatagtaaggcaatgttatgaagatttcgggctt
accagaacggtgaagcttgtggatgacttgaaggatataggatttaaatatgctaaagaa
tctggaatatctatttcaattgatgatcttgttgtacctgcagaaaagaaagaaataata
aagagggcagaagaagaaattaaaagatttgatgaatttgtttctgaaggtactatgact
caagaagaaaaggatgctaaagtaagagaaaagtggaatatgattactgacgaaattaag
gacagaatgaactccagtatgggtgaaagaaaccccgtttttatgatggcaaattctggt
gcaagaggcaatatcgatcaagttagacagctggctgcaatgagaggtcttatgtcagat
ccacacggtagaatcatacctattcctataaaggcaaaccttaaagaaggcatgaatatg
atggaatattttatttcaacatatggtgcaagaaaaggtttggtcgatactgcactaagg
acttctaactctggatatcttacaagaagactggtcgatgttgcacaagaaataatcgtg
agagaagaagattgtggcagcgaagaaagtattgtagtttctgatctgatggatggaaca
aaggttattttggaattaaaagacagaataattggtaggtttagcgctgaagatatttat
gatgctgatggaaaattaatagttaaaagaaatgaactaataactccttctatagctgat
aagatagtagatgctggaataaaagaagtagctgtaagatctcctttaacctgtaaaaca
cctcatggagtgtgtcaaaaatgttacggttggagtcttgctaccagggaagttgtagaa
cttggtgaagctgtgggcattattgctgcacaatctataggggagcctggtactcagctg
actatgagaacatttcacactggtggggttgctcttcataggagtaagaatatagaaaga
tcaaagattagtggtacagtaaagttcgaatctcttaagacgttcacttttttgaacgat
aacatagagactactatagctatttctgaaggaaatatcgtgataaaaggagagacaagc
gttaaagtttttgtaaatagagggatgcttctacacgttaaggatggttcttttgttaaa
gaaaacgatgtcttggttgaggaagatgaggataatgaatatcttatagcagagaagggt
aatattgttttttatacaatgcctgttgaggaaagagttatatctgagaataacgtaata
agtattgcttctcaaaatggtgaagttttgtttactaaagaaaaaccaataataataaag
gttaatgccaatcttgatattaagatcaaagatagagaaaaagtagtaccaggtaaagag
attgcggaaggtataacgagtccagttttaggtatggctgttatcccaaagtttgaacca
gttttggactctgaaactggtgagatggttacacctatatacatttatcagggtgatttt
gcttcgtgtaataagaattcaagattatttgtaaaagattcaacaatgttaaccaacact
acattagttgcaatttcacctaaatcaaaagaaagtgcaattaagacaaaggatattatt
cagggtttgcccagggtcgaagagctttttgaagcaaggagaccaaaaaatgctgcaata
ctttcagaaatagatggaatagtccatattatttccaatagtgatacagaccctataaaa
attataatagaagggttggaagagacaaaggaaattgttgtacctgcaagcacacagctt
caggtatcggatggtgcctttattaaaaaaggatatcctcttacagaaggtcaattttat
cctcaggaactacttaaaactagaggaatagatgcagtaaagcaatatatagttgatgaa
attcaaaaggtttataaagatcaaagcgtttctattcatgataaacacattgaaattata
gttagacaaatgactaagagagtaaagattaaaaatgacggcgattctgattggttgcca
ggagaatatgtagatagaggtgaatttgaaaaggtggtcaaagagttaactcttcagggt
aaaactcccccagaagcagaagatgcggtgcttggcattacgaaatcgtctttgaataca
tcttcatttattgctgctgcctctttccaggagactaccagaatattaactgaggcatca
attagaggcaaaatagactatcttagaggtttgaaagaaaacgttgtaataggaagatta
attcctgctggaactgggtttgatttatatgaaagttatgactatgttaaagtaggtgat
aagtag
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integrated database retrieval system
