Thermodesulfobium acidiphilum: TDSAC_1351
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Entry
TDSAC_1351 CDS
T05396
Name
(GenBank) DNA helicase-2 / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
taci
Thermodesulfobium acidiphilum
Pathway
taci03420
Nucleotide excision repair
taci03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
taci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TDSAC_1351
03430 Mismatch repair
TDSAC_1351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taci03400
]
TDSAC_1351
Enzymes [BR:
taci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TDSAC_1351
DNA repair and recombination proteins [BR:
taci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TDSAC_1351
MMR (mismatch excision repair)
Other MMR factors
TDSAC_1351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_22
ResIII
DEAD
SLFN-g3_helicase
AAA_11
NPHP3_N
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
AWB10691
UniProt:
A0A2R4W1K8
LinkDB
All DBs
Position
complement(1332891..1334732)
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AA seq
613 aa
AA seq
DB search
MYILDSNLNEEQKRAVYSDSRALLIVAGAGTGKTRVLTTRAARLIKENPDARYLLLTFTK
KAAMEMTTRVRDLIREDTKNRLYSGTFHSFCSNIIRRHSERIGLTNDFVIIDESDSLDLM
KKVFSRIYSKEKLDSLIFKPKDILSIYSYARNNNQDFIEIIQRKYKYVNFEDIKKIVNLY
ELSKRERNYLDFDDLLMYGLLSIKALEKSPFDEVLVDEFQDTNQIQAEMLYRFYYLGSRI
SAVGDDAQSIYSFRGAYYKNMFDFIKRLDAEKIILSSNYRSTQPILDIANSIIQSSYNSI
KKELIANVKLKDNVKPKLVIVSDDWEEARYVAREMQKFNEKGLKVAALYRAAYIGRNLES
QLNSMGIKYSFYGGQKLTESAHAKDFMSFLRVFVNPKDEIALIRILRMFPGIGEKKAEKI
KNAVINGGNLKIALSKEKNLEELNLFFEKLFETTDWHDILELIFNFYKDIMIRLYPENYE
EREADLIKFMDMSSNYDNLVDYLEAFTLNPVERVEFDNNNVILSTIHSAKGLEFDVVFLL
SVIESVYPHFKAQSTDEIEEERRLFYVAITRAKQRLLFIFPRHSKKNRGYFAKNTISPFL
REKDSYLDVSIVG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
gtgtatattttggattcaaacttaaacgaagaacaaaaaagggctgtatactctgatagc
agggcgcttttgatagtagctggtgcaggcacaggcaaaacaagggttttaacaaccagg
gcagcaagacttataaaagagaacccggatgcgaggtatcttttgctcacatttactaag
aaggcagcaatggaaatgactacaagagttagggacttgataagagaagacactaaaaat
aggctttattctggaacctttcattccttttgttcgaatataattagaaggcattcagaa
agaattgggttgaccaacgattttgtcataattgatgaatctgactctcttgacctgatg
aagaaggtattttctagaatatatagtaaagaaaaacttgattcgctgatatttaaacca
aaagatattttatcaatatattcatatgcaagaaataataaccaggattttattgagatc
attcaaagaaaatataaatatgttaactttgaagatatcaaaaagattgtaaatttatat
gaactaagcaaaagagaaagaaattatttggatttcgacgatcttttgatgtacggattg
ctttcaattaaagctcttgaaaaaagtcctttcgacgaagttttggtagatgaatttcaa
gatacaaatcaaattcaggccgaaatgttgtaccgtttctattatttaggttcaaggata
agtgcagttggagatgacgctcaaagcatttattcttttaggggggcttattataaaaat
atgtttgattttatcaaaagacttgatgctgaaaaaattattctttcttcaaactacagg
tcaactcaaccaattttggatattgctaattctatcattcagtcttcatataattctatt
aaaaaggaattgatagctaatgtaaaactaaaggataacgttaagcctaaattggtaatt
gttagtgacgactgggaagaagcaaggtatgtggctagagaaatgcaaaaattcaatgaa
aagggtttaaaggtggcagctttatatagggcagcgtatattggtagaaaccttgaaagc
caacttaactctatgggaataaaatattctttttatggaggtcaaaaattaactgaaagc
gctcatgctaaagattttatgtcgtttttgagagtttttgtaaatccaaaggatgaaata
gcattgattagaattttgaggatgtttcctggaattggcgaaaaaaaagcagaaaagatt
aaaaatgctgtgattaatggaggtaatttaaagattgcattgtctaaagaaaaaaatctt
gaagaattaaatcttttttttgaaaaattatttgaaactaccgactggcatgatatccta
gaattaatttttaatttttataaggatataatgatcagactttaccctgaaaattatgaa
gaaagagaagcagatttaatcaaattcatggatatgagttctaattatgataatttggta
gactatcttgaagcttttacacttaatccggttgaaagggttgaatttgacaataataat
gtaatcttaagcactattcattcagcaaagggattggaatttgacgtagtattcttgtta
tcagtgatcgaaagcgtttatccacactttaaagcccaatcgactgatgaaatagaagaa
gagagaagactattttatgtagcaataactagggcaaaacaaagacttttattcatattt
cccagacattcaaagaaaaatagaggctattttgcgaaaaacactatctctcccttttta
agagaaaaggatagttatcttgatgtttctattgtaggataa
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