Thermodesulfobium acidiphilum: TDSAC_1505
Help
Entry
TDSAC_1505 CDS
T05396
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
taci
Thermodesulfobium acidiphilum
Pathway
taci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TDSAC_1505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taci03019
]
TDSAC_1505
03009 Ribosome biogenesis [BR:
taci03009
]
TDSAC_1505
Enzymes [BR:
taci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TDSAC_1505
Messenger RNA biogenesis [BR:
taci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TDSAC_1505
Ribosome biogenesis [BR:
taci03009
]
Prokaryotic type
rRNA helicases
TDSAC_1505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
UTP25_NTPase-like
WSD
NAT10_TcmA_helicase
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AWB10844
UniProt:
A0A2R4W270
LinkDB
All DBs
Position
1485896..1487491
Genome browser
AA seq
531 aa
AA seq
DB search
MSKSAYFGEIKLSEDTILALKEMGFEEPSEIQKQTIPIVMQGFDVIGQAQTGTGKTAAFG
IPIAEKTTKDRIPQSLVLTPTRELAIQVAEEVSKISKYKGLRVVPIYGGQSIERQIKALK
NGAQVIIGTPGRLIDHIKRGTLFLSQISMLVLDEADEMLDMGFIEDIETILKSIKNENKQ
TLLFSATMPDPIMALTKKYMKNPKVVSISKEQLTVPLTDQFYCEAKDKLEALCRILETED
MDKTIIFCRTKKGVDELVASLNTRGYSAEGLHGDLTQAQRDKVMRSFREKKLEVLVATDV
AARGLDISDVSHVINFDIPQDPESYVHRIGRTGRAGKSGIAITFITPREFRQLRLIEKVI
RTTIKRKEVPSISDLLEKQKDELKSLISKIIKQEKISHYVSIVEEMTEEFEPERIAAAAI
RLYQEGEPEEKLEVDKERFKKTGAKEGMTRLFINIGKEKNISKEDIVNYICEEGDMKKKD
IKNIRILDKFTFLEVPEEVSERIIAVLHKSVIKGHKIHAEPARPIRKNENF
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaaagagtgcttattttggagaaattaaattaagcgaagacacaattttagcttta
aaggagatgggttttgaagaaccatccgagatccaaaaacaaacaataccaattgtaatg
cagggatttgatgtaataggccaggctcaaactggaactggtaaaactgcagcatttgga
attccaatagctgaaaaaacaacaaaggatagaattcctcaatcactggtattaactcct
acaagggaacttgcaatacaggttgccgaagaagtatctaaaatctcaaaatataaagga
cttagagtagttcccatttacggtggacaatctattgaaagacagataaaagctctaaaa
aatggagctcaagtaataataggtacgcctggaaggttaattgatcacattaagagagga
acattatttttgtcccaaatttcaatgcttgtacttgatgaagctgatgaaatgcttgat
atgggttttattgaagatatagaaacaattttgaaatcgattaaaaacgaaaacaaacag
actctcctattttcagcaactatgccagatccaatcatggcacttaccaaaaaatatatg
aaaaatccaaaagttgtctcaataagcaaagagcaacttacagtacctttgacagatcag
ttttattgtgaggccaaagataaacttgaagccctttgtcgtatattagaaacagaagat
atggacaaaacaattatattttgtagaacaaaaaagggcgtagatgaattagttgcttca
ttaaatacaaggggatacagcgccgaaggtctacacggtgatttgacgcaagcacagaga
gataaagtaatgagatcatttagagagaaaaaattagaagttcttgtggcaacagacgta
gcggcaagagggcttgatatttctgacgttagccatgtaattaattttgatatacctcaa
gacccagaatcgtacgttcacagaatcgggagaacagggagagcaggtaaatcgggtata
gctattacttttataacccccagggagtttagacaattaagattgattgaaaaagttatt
agaacgactatcaagagaaaggaggtcccaagcatttcagatcttttggaaaagcaaaaa
gatgaattgaagagtttaatttctaaaataatcaaacaggaaaaaatatcgcattacgtt
tcaatagtcgaagaaatgactgaggaatttgaacccgaaagaattgcggccgcagcaatt
aggttataccaggaaggagaaccagaagaaaaacttgaggtcgacaaagaaaggttcaaa
aaaacaggagcaaaagaaggtatgacaaggctttttataaatattggcaaagagaaaaat
atttcgaaagaagacattgtaaactatatatgtgaagaaggagatatgaagaagaaagac
ataaaaaatataagaatattagataaatttactttcctagaagtgccagaagaagtatca
gaaagaataattgcagtattgcacaaatcagttataaagggacataaaatccatgcagag
cctgcaaggcctataaggaaaaatgaaaatttttaa
DBGET
integrated database retrieval system
