Thalassomonas actiniarum: SG35_000650
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Entry
SG35_000650 CDS
T08826
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tact
Thalassomonas actiniarum
Pathway
tact03030
DNA replication
tact03410
Base excision repair
tact03420
Nucleotide excision repair
tact03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tact00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SG35_000650 (polA)
03410 Base excision repair
SG35_000650 (polA)
03420 Nucleotide excision repair
SG35_000650 (polA)
03440 Homologous recombination
SG35_000650 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tact03032
]
SG35_000650 (polA)
03400 DNA repair and recombination proteins [BR:
tact03400
]
SG35_000650 (polA)
Enzymes [BR:
tact01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SG35_000650 (polA)
DNA replication proteins [BR:
tact03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SG35_000650 (polA)
DNA repair and recombination proteins [BR:
tact03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SG35_000650 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SG35_000650 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DUF7653
Motif
Other DBs
NCBI-ProteinID:
WDD99233
UniProt:
A0AAF0C3Q8
LinkDB
All DBs
Position
145692..148430
Genome browser
AA seq
912 aa
AA seq
DB search
MTTSSLSPLILVDGSSYLFRAYHVPYLQALSTADGQPTGAITGVLNMINSLKKDYPQGNV
VVVFDAKGKTFRNDLYPEYKANRPPMPEDLRCQIAPIHEIIGAMGLPLLVIEGVEADDVI
GTLARQACDLGIETVISTGDKDMAQLVSPNVRLINTMTNVEMDEAGVVEKFGVKPDRIID
YLALMGDKVDNIPGVEKCGPKTAVKWLTAYDSLDGVIANADQVKGKVGENLRAALTQLPL
SYELATIKLDVELEQGVSELQPKEADVEALTSLYQKFELRRLLADLTSGKGAGDKGDEGE
AEEKAEQQVEADYDIIYEQAAFEAWLKELTAADYFAFDTETTSVDYMKAELVGLSFACQP
GKAAYVPLKHDYEDAPEQLDIDYVLGKLKPLLEDKNKAKLGQNLKYDANVLSHYDIELQG
VAFDTMIESYCLNSVATRHNMDALAEKYLGYKTVHFEDIAGKGAKQLTFNQIEIEKAGFY
AAEDADITLRLHQAIYPQLEKSANQLSVYNDIELPLMPVLAKMEQHGVLIDCDLLDQQSQ
SLGKRLEELEVEAHNLAGKSFNLGSPKQLQQILFEELKIPVIKKTPKGAPSTAEEVLQEL
ALDYPLPKLILENRGLSKLKSTYTDKLPLMVAGKTNRVHTSYHQAVAATGRLSSTDPNLQ
NIPIRSEEGRKIREAFIAPQDHKIVAIDYSQIELRIMAHLSGDAGLVSAFAQGRDVHRAT
AAEIFAVDLDQVTGDQRRSAKAINFGLIYGMSAFGLSKQLDIGRHQAQQYMDKYFERYPG
VLTYMEDTRAQATEQGYVETLFGRRLYLPDIKSKNQMRKKGAERAAINAPMQGTAADIIK
KAMLAVDSWITEQNDPRIKMTMQVHDELIFEIHQDIVEETTAKLVEIMNNAVDLDVPLIA
EAGIGDNWHQAH
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgtcttcattatctccgcttattctcgtcgatggctcctcgtatttattccgt
gcttatcatgttccttaccttcaggcactgtcgactgccgatggtcagcctaccggggcg
attaccggggtgctgaatatgatcaacagcctgaaaaaagactaccctcagggtaatgtc
gtggtggtttttgatgccaaaggaaaaactttccgtaatgatctttatccggaatataaa
gccaaccgtccgccgatgccggaagatttgcgctgccagatagcgcctatccacgagatt
atcggcgccatgggattgcctttattggtcattgaaggggtagaagccgatgatgttatt
ggcaccctggcgcgccaggcctgtgatctgggcatagaaacggtgatctccaccggtgat
aaggatatggcccagctggtaagcccgaatgtcaggctgatcaataccatgaccaatgta
gagatggatgaagccggggttgtggaaaaattcggggtgaaaccggaccggatcatagat
tatctggcgctgatgggggataaggtcgataacatccccggggtggaaaaatgcggcccg
aaaactgcggttaagtggctgactgcctacgacagtttagacggggtcattgccaatgcc
gaccaggtaaaaggcaaggtaggggaaaacctgcgggcggcactgacccagctgccgtta
tcctatgaactggccaccatcaagctcgatgtcgagctggagcagggggttagcgagtta
cagccgaaagaggcggatgttgaagccctgacgtctctttatcaaaaatttgaattacgc
cgtttgcttgcggacctgacttccggcaagggagcgggtgacaaaggtgacgaaggtgaa
gccgaggaaaaagccgaacagcaagttgaggctgattacgacattatttacgagcaggca
gcttttgaagcctggctgaaagaattaacggcagcggattattttgcctttgataccgaa
accaccagtgtcgattatatgaaagccgaactggttggtttgtcttttgcgtgtcagccg
ggtaaagctgcctatgtgccgttaaaacatgattatgaagatgcccccgagcaactggat
atcgactatgtgctcggtaaattaaagcctttgctggaagataagaataaagccaaactt
ggccaaaacctgaaatacgatgccaatgtgctttcccattatgatattgagctccagggt
gtggcatttgataccatgatagaatcctattgtttaaacagtgtcgccacccgccacaat
atggatgcattggcagaaaagtacctgggttataaaaccgtacattttgaagatattgcc
ggtaaaggggccaagcagctgacgtttaaccagatagaaatcgaaaaagcgggtttttat
gccgccgaagatgctgatattaccttgcggttgcaccaggctatttacccgcagttggaa
aaatctgccaatcagttaagtgtttataatgacattgaattgccgctgatgccggtgctg
gcgaaaatggagcagcacggggtcttgatcgattgtgatctgctggatcagcaaagccag
agcttaggcaaacgactggaagagctggaagtggaagcccataacctggcaggaaaatcc
tttaacctcggctcgcctaagcagttgcagcaaattttatttgaagagctgaaaatcccg
gtgatcaagaaaactcccaagggggcaccttctaccgcagaagaagtgttacaggagctg
gcgctggattatccgttgccgaaacttatcctggaaaaccgcggcctgagtaagcttaaa
tctacctataccgataagttgccgttaatggttgccgggaaaaccaaccgggtgcatacc
tcctatcatcaggcggtagcggccaccggacgtttgtcttccaccgatcctaacctgcag
aatattccgatccgcagtgaagaagggcgtaagatccgcgaggcctttatcgccccgcaa
gaccataaaattgtcgccatcgattactcgcaaattgaattgcgtattatggcgcacctg
tccggtgatgccggtttagtgagtgcctttgcccagggacgtgatgttcaccgggcgacg
gcggcagaaatttttgccgtagacctggatcaggttaccggcgatcagcgccgcagcgcc
aaggccattaactttggtttgatttacggtatgtcggcatttggcttgtccaaacagctg
gatatcggccgccaccaggcgcagcaatatatggataagtactttgaacgttatccgggc
gtattgacctatatggaagatacccgggcacaggctaccgagcagggttatgttgaaacc
ctgtttggccgtcgcttgtatctgcctgatatcaaatcgaaaaatcagatgcgcaaaaaa
ggcgccgagcgcgccgctatcaatgctcctatgcagggcacggcggcagatattatcaag
aaagcgatgttggcggtagacagctggatcacagagcaaaacgatccgcgcattaaaatg
acgatgcaggtacacgatgaactgatttttgaaattcatcaggatatcgttgaagaaacc
acggctaaactggtggagatcatgaataatgccgttgatctggatgtaccgttaattgcc
gaagccggtatcggcgataactggcatcaggcccattaa
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