Thalassomonas actiniarum: SG35_001040
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Entry
SG35_001040 CDS
T08826
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
tact
Thalassomonas actiniarum
Pathway
tact02020
Two-component system
tact02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tact00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SG35_001040
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SG35_001040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tact03021
]
SG35_001040
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tact02035
]
SG35_001040
Transcription machinery [BR:
tact03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SG35_001040
Bacterial motility proteins [BR:
tact02035
]
Flagellar system
Flagellar assembly proteins
Stator
SG35_001040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r4_2
Seryl_tRNA_N
T3SS_ATPase_C
DUF4347
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
WDD99306
UniProt:
A0AAF0C1R9
LinkDB
All DBs
Position
complement(224121..224837)
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AA seq
238 aa
AA seq
DB search
MNQSLAWKENSEDLTLPGQEEEQLLIKYLYLVKRAVSHLRSQVSTLQSYEDLIQIGTMGL
LEAIRRYGSEPDDVFEGYAFKRIRGAILDELRRQDWRPRQARQQAHKLNRARRNLLKELG
REPSEEELAASLDVDVKQIQAMEFDNVAEEMHSLDELLQVDSNVLSYDCTTDNGEMKQAL
AQTLALLDKREQLLLTLYYQYELNMKEIALTLKITESRVCQLHKLAIKHLHTLLAQQL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcagagccttgcctggaaagaaaacagtgaagatctgaccttgcccggtcaggaa
gaagagcagctgctgatcaaatacctgtacctggtgaaaagggctgtcagccacttgcgc
agccaggtcagtaccttgcagtcgtacgaagatctgatccaaatcggcaccatgggcttg
ctcgaagctatccgccgctatggcagcgaacccgacgatgtctttgaaggttatgccttt
aaacgcatccgcggcgccattctcgatgaattacgccgtcaggactggcgtccgcgccag
gccaggcaacaggcacacaaacttaaccgcgcccggcgcaacctgctcaaagagctggga
cgcgagccgagcgaagaagaactggccgccagcctcgacgtggatgtcaaacaaatacag
gcgatggaatttgataatgtcgccgaagaaatgcacagcctggacgagctgctgcaggta
gacagcaatgttttatcttacgattgcacgaccgacaacggcgaaatgaaacaggcgctg
gcacaaaccctggcgctgctggataaaagagagcaactgttactcaccttatattaccaa
tatgaactcaacatgaaagaaatcgccctgaccttaaaaatcaccgaatcccgggtttgc
cagttgcataaactggcgattaaacatcttcacactctgctggcacagcagctctaa
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