Thalassomonas actiniarum: SG35_004975
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Entry
SG35_004975 CDS
T08826
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tact
Thalassomonas actiniarum
Pathway
tact03410
Base excision repair
tact03430
Mismatch repair
tact03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tact00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SG35_004975 (recJ)
03430 Mismatch repair
SG35_004975 (recJ)
03440 Homologous recombination
SG35_004975 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tact03400
]
SG35_004975 (recJ)
DNA repair and recombination proteins [BR:
tact03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SG35_004975 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SG35_004975 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SG35_004975 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
TADA2A-like_3rd
Motif
Other DBs
NCBI-ProteinID:
WDE00018
UniProt:
A0AAE9YSP6
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All DBs
Position
1123937..1125700
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AA seq
587 aa
AA seq
DB search
MLKQIIRRPFVADEHLSGDLHPLIKQIYARRGVTCARELDLTTSQMAPVQSLKGLDDACR
ILHLAMAQQQRIIVVGDFDADGATSTALMMEALMLLGSTNHDFLVPNRFEYGYGLTPEIV
DLAAGQGAQLLVTVDNGISCLAGVKRAKELGIAVVVTDHHLPGSQLPDADAIVNPNQPGC
PFPSKALAGVGVAFYLMLALRKYLRDLNWFGEKGMAEPNIAQLLDLVALGTVADVVTLDN
NNRILVSQGLKRIRAGLTRPGIQALIEIANKNQQALVASDFGFALGPRINAAGRLDDMSF
GINCLLSKDLMSARAAAVELDELNKARREIEQGMQVEAESVLKQLKFNEDNLPCGIALFQ
QDWHQGVIGIVCGRLKEKYHRPSIVFAAAGDGIEDKSKDEIKGSARSIPGLHIRDLLEHI
DSQNPGLILKFGGHAMAAGLSIKAGDFDKFRQLFDSFVGDWLSEEDFQGKLLSDGALPLT
DMTLAFAETIREAGPWGQNFVEPVFDDEFTLIQQRLVGEKHLKMVVQKGSEVFDAIAFNI
DVKAWPNIHAKQVHLAYRLDINEFRGKQSLQLMVEQLSLPGDSNEGL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacaaatcatccgtcgtccctttgttgcggatgaacacttatccggcgattta
catccgctgattaaacaaatttatgcccgccgtggtgtcacctgtgcccgggagctggac
ttaactacttcacaaatggcgccggtgcagtcattaaaaggcctggatgatgcctgccgt
attttacacctggcgatggcgcagcagcagcgcattattgtcgtcggggattttgatgcc
gacggcgccaccagtaccgcgctgatgatggaagcgttaatgttgctcggcagcacgaac
catgattttctggtgccgaatcgttttgagtacggttacggtctgaccccggaaattgtc
gacctggccgccggacaaggggcgcagttattggtgacggtcgataacggcatcagctgt
ctggcgggggtaaaacgtgcaaaagagctcggcattgccgtggtggtgacagatcatcat
ttgcccggcagtcagctaccggatgccgatgccatagtgaacccgaatcagcccggctgt
ccctttcccagtaaagcactagccggggtcggggtcgccttttacctgatgctggccctg
cgtaaatatttacgggatcttaactggttcggtgaaaaaggcatggctgaacctaatatc
gcccaactgcttgatttggttgctttaggcacggttgctgatgtcgtgaccttagataac
aataaccgtattttagtgtcacagggattaaaacggatccgggcgggattaacgcgcccg
gggatccaggctttgattgaaattgccaataaaaaccagcaggcgctggtggccagcgat
tttggttttgctttgggaccgagaataaatgccgccggtcgtctcgatgatatgtcattt
ggtatcaactgcttattgtcaaaggacctgatgtctgcccgggccgcggccgttgagctg
gatgaattaaacaaagctcgccgggaaatcgaacagggcatgcaggtagaagcggaaagc
gtgctcaagcagttgaaatttaacgaagataatctgccctgcggtattgccctgttccag
caagactggcatcagggggtgattggcatagtgtgcgggcggttaaaagagaaatatcac
aggcccagcatcgtttttgccgccgccggtgatggcatagaagataagagtaaggatgaa
attaaaggctcggcacgctcgatccccggtttgcacatccgggatttgctcgaacatatc
gacagccagaaccccgggctgatcctgaaatttggcggccatgccatggctgccggctta
tccattaaagccggtgattttgataagttcaggcaattattcgacagctttgtcggtgac
tggctcagtgaagaggacttccagggaaaactgctttccgacggggccttgccgcttacc
gacatgaccttggcctttgccgaaaccatcagggaagccggcccctgggggcaaaatttt
gtcgagcctgtgtttgatgatgagtttaccctgatacagcagcgcctggtgggggaaaaa
catttgaaaatggtggtgcaaaaaggcagcgaagtctttgatgccatcgcctttaatatt
gatgttaaggcctggcctaatatccacgccaaacaagtgcatctggcttaccggttagat
atcaatgagtttagaggtaaacaaagcttacagttgatggtggagcagttatcgttgccg
ggagactctaatgaaggcctttaa
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