Thalassomonas actiniarum: SG35_009995
Help
Entry
SG35_009995 CDS
T08826
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tact
Thalassomonas actiniarum
Brite
KEGG Orthology (KO) [BR:
tact00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tact03032
]
SG35_009995 (topA)
03400 DNA repair and recombination proteins [BR:
tact03400
]
SG35_009995 (topA)
Enzymes [BR:
tact01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SG35_009995 (topA)
DNA replication proteins [BR:
tact03032
]
Prokaryotic type
DNA Topoisomerases
SG35_009995 (topA)
DNA repair and recombination proteins [BR:
tact03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SG35_009995 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WDE00924
UniProt:
A0AAE9YV49
LinkDB
All DBs
Position
2308908..2311589
Genome browser
AA seq
893 aa
AA seq
DB search
MAKSLVIVESPAKAKTINKYLGKDFVVKSSVGHVRDLPTSSTGKKVAAKSPAEVRKMSPE
AKAKYKQKRDKQALVNRMGIDPEKDWQANYQILPGKEKVVNELKKLADTADTVYLATDLD
REGEAIAWHLKEIIGGSDEKFRRVVFNEITENAIQQAFSTPGELSMPGVNAQQARRFLDR
VVGFMVSPLLWKKVARGLSAGRVQSVAVKLVVEREREIKAFIPKEFWEINADTRTKDAQQ
LNLDVTHENGKAFKPTNETEAKQARAILESAQFSVSKREDRPSKSTPSAPFITSTLQQAA
STRLGFGVKRTMGLAQRLYEAGHITYMRTDSTNLSKDAVEMCRNYISESFGENYLPEKAK
TYGSKAGAQEAHEAIRPSNVKLESAFMSDMEADAKKLYDLIWRQFVACQMTAARYDVSTL
TVSADKFDLKAKGRVMKFDGWTRVHPQLSKGDDTHLPDIAVGEMLTLDKLTPSQHFTKPV
ARFGEASLVKELEKRSIGRPSTYASIISTIQDRGYVRLDKKRFYAEKMGEIVTDSLSKSF
EKLMSFDFTANMEQELDEIAEGQIDWKTVLNEFYKNFTDKLSLADKPADEGGMPSNEPVT
TDIDCPTCGRKMGIRTASTGVFLGCTGYALPPKERCTTTMNLTSGEEAVSVLAEDQETEA
LRAMHRCPKCQTAMDSYLIDETRKLHVCGNNPECDGYELEQGTFKIKGYDGPVLECDRCG
SQMELKSGRFGKYFGCTNEECKNTRKLLKNGEAAPPKEDPVQLPELPCEQSDAHFVLRDG
AAGIFMAASTFPRSRETRAPKVAELQRFRDRISSKFYYLADAPEKDPEGNLAVVRFSRKT
KEQYVMTEVEGKATGWVAKYVDGKWVEEQTKKKAPAKKKAAAKPKAKATAAKA
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatctctggtaattgtcgagtcaccagccaaagcaaagacaattaacaaatac
cttggtaaagactttgttgtgaagtcaagtgtcggtcatgtccgtgatttgccgaccagc
agtaccggtaaaaaagttgctgcaaaatctcccgccgaagtgcgcaaaatgtcaccggaa
gcgaaagcgaaatacaagcaaaaacgtgataagcaggccctggtcaatcgcatgggcata
gaccctgaaaaagactggcaggccaattaccagatccttcccggcaaggaaaaagtggtc
aatgaactgaaaaaacttgctgacacggcagatactgtctatctcgcaaccgatttggat
cgcgagggagaagcgatagcctggcacttaaaagaaatcatcggcggcagcgacgaaaaa
ttccgccgggtggtgtttaacgaaattaccgaaaatgccattcaacaggcattctctacc
ccgggtgaactcagtatgcccggtgttaatgcccagcaggcaagacgttttcttgaccgg
gttgtcggttttatggtcagtccgctgttgtggaaaaaagtggcccgcggcttatctgcc
ggccgggtacagtcggtggcggttaagctggtggttgagcgggagcgggaaatcaaggct
tttatcccgaaagagttttgggaaattaatgccgatacccgcacaaaggatgctcagcag
cttaacctggacgttacccatgaaaatggcaaggcctttaagccgaccaatgaaaccgag
gcgaaacaagcccgggcaatactggaaagtgcccaattcagcgtcagtaagcgtgaagac
aggccttcgaaaagtacgccttctgcgccttttattacctctaccttacaacaggctgcc
agcacccggttaggttttggcgttaagcgtaccatggggttggcgcagcgactatatgaa
gccggtcatattacttatatgcgtaccgactcaaccaatctgagtaaagatgcggtggaa
atgtgccgcaattatatcagtgaaagctttggtgaaaactatttgccggaaaaggcaaaa
acctatggcagcaaagccggtgctcaggaagcgcatgaggcgatccgcccttcgaatgtg
aagctcgaatcggcctttatgtcagatatggaagccgatgccaagaaactctatgacttg
atttggcgtcagtttgtcgcctgtcaaatgacagcagcccgttatgatgtcagtaccctg
accgtcagtgccgataagtttgacttaaaagccaagggccgggtgatgaagtttgacggc
tggacccgggttcatccgcagttatctaaaggtgacgatacgcatttaccggatattgcc
gttggcgaaatgttaaccctggataagctgaccccgtcccagcattttactaaacccgtg
gcgcgttttggtgaagcctccctggtaaaagagctggaaaaacgttcaatcggccgtcct
tctacttatgcctctattatttccactatccaggaccgcggttatgtgcgtctggataaa
aagcgtttttatgcggaaaaaatgggtgaaatagtcaccgacagtttgtcgaaaagcttt
gaaaaactgatgagctttgatttcaccgccaatatggagcaggagctggatgaaattgcc
gaagggcaaattgactggaaaacggtattaaatgagttctataagaactttaccgataaa
ttaagcctggcggataaacccgccgatgaaggcggtatgcccagtaatgagccggtcacc
acggatattgattgtcctacctgtggccgtaaaatgggtataagaaccgcgtctaccggg
gtgtttttgggctgtaccggttatgcgctgccgccaaaagagcgctgtaccaccaccatg
aacctgacctcgggtgaagaagcggtgagtgtgctggcagaagatcaggaaaccgaagcg
ctgcgcgccatgcaccgttgtcctaaatgtcagacggcgatggacagctacttaatcgat
gaaacccgcaaattacatgtttgtggtaataaccctgaatgtgacggttatgagcttgag
cagggcacctttaagatcaaaggctatgacggcccggtactggaatgtgatcgctgtggc
tcacaaatggaattgaaatccggacgtttcggcaagtatttcggctgtactaacgaggaa
tgtaaaaatacccgtaagttattgaaaaatggcgaagccgcgccgccgaaagaagatccg
gtacaattgcctgaattgccctgtgaacaatccgatgcccactttgtgcttcgcgacggt
gctgccggtatctttatggccgccagtacttttccacgctccagggaaacccgggcgcct
aaagtggcggaattgcaaagattcagagatcgtatctcttccaagttttactacctggcg
gatgcgccggaaaaagatccagaaggcaatttagccgtagtgcgtttcagccgcaaaacc
aaagagcaatacgtgatgacggaagtcgagggtaaggcgaccggttgggtagcgaaatat
gtcgacggcaaatgggtagaagagcagacgaagaagaaagcccccgctaaaaagaaagcg
gcggctaaacccaaagcgaaggccactgccgctaaagcctga
DBGET
integrated database retrieval system
