Thalassomonas actiniarum: SG35_012595
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Entry
SG35_012595 CDS
T08826
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tact
Thalassomonas actiniarum
Pathway
tact03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tact00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SG35_012595 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tact03019
]
SG35_012595 (recQ)
03400 DNA repair and recombination proteins [BR:
tact03400
]
SG35_012595 (recQ)
Enzymes [BR:
tact01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SG35_012595 (recQ)
Messenger RNA biogenesis [BR:
tact03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SG35_012595 (recQ)
DNA repair and recombination proteins [BR:
tact03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SG35_012595 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
WDE01386
UniProt:
A0AAE9YUK2
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All DBs
Position
2894031..2895833
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AA seq
600 aa
AA seq
DB search
MNKAALSVLNTVFGYPEFRSPQDEVIDTVINGGDALVLMPTGGGKSLCYQIPALIRPGCA
IVISPLIALMQDQVNALTQLGINAGFLNSTLDNNQALAVEQALFQGELELLYIAPERLTQ
PRTLSMLQQCSIALFAIDEAHCVSQWGHDFRADYLELSLLHQQFPSVPRIALTATADPRT
HQEISERLQLDQARHFIAGFDRPNIQYRIHQKHNGRQQLLSFIRSEHEHDAGIVYCLSRK
KTEETASWLCQQGLQALPYHAGLAPQVKEQHQNRFLREDGIIIVATIAFGMGIDKPDVRF
VAHLDLPKSIESYYQETGRAGRDGQAATAWMVYGLQDVIKLKQMLDRSEAPDMQKRIERQ
RLDAMLGLCEITTCRRQTLLAYFNEHLHRPCGNCDTCITPVQTWDGTEAARKALSCVYRT
GQRFGVNHLIDVLLGKSTAKVQQFHHQTLSTYAIGSELESNQWHSVFRQLVSRGYIYADM
DSFGAFKLTEKCRPLLRGEQSIELRKDNTGKMKKKKASKSAAVPEYAQPLWEALRALRKQ
LADEHGVPAYTVFHDSTMMEMISIRPENREQLLNISGVGVSKLDKYGEQFLAVIAEHNQQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcagccctgtcggtactcaataccgtttttggttaccccgaatttagaagc
ccccaggatgaagtcattgacactgtgattaatggtggcgatgccctggtattaatgccg
acaggtggcggtaagtctctttgttatcaaatacctgcactgatccgcccggggtgtgcc
attgttatttcaccgctgattgccttaatgcaggaccaggtgaatgcactgacccagctg
ggcattaatgccggttttttaaattcaacgctggataacaatcaggctttagcggttgag
caggcgctttttcagggggaattagagctactttatattgcccccgagcgtttaacccag
cccagaaccttgtccatgctgcagcaatgctctattgccttatttgccattgatgaagcc
cattgtgtttcgcagtgggggcatgactttcgggcagattatctagagttgtcgttatta
caccagcaatttccttcggtgccgcgcatcgccttaacggcgacggcggatccccgcacc
catcaggaaatcagcgaaagactgcagcttgatcaggccaggcattttatcgccgggttt
gaccggccgaatatccagtatcgcatccatcaaaagcataatggccgccagcagttatta
agctttatccgcagcgagcatgaacatgacgccggtattgtttattgcctgtcccgcaaa
aaaaccgaagaaaccgccagctggttatgccagcaggggttacaggccttgccttatcat
gccgggttagcaccacaggtgaaagagcagcatcaaaaccgttttttacgggaagacggc
attattatcgtcgccaccatcgcttttggcatgggcatagataaacccgatgtccgtttt
gttgcccatctcgacttgccaaaaagcatagagtcttattatcaggaaaccgggcgggca
gggcgtgacggccaggcggcgactgcctggatggtttatggcttgcaggatgtgatcaag
ctcaaacagatgctggacagatccgaagcccccgacatgcaaaagcgcattgaacgccag
cgtttagatgccatgttagggctttgtgaaattaccacctgccgcaggcaaaccttattg
gcttattttaatgaacatttgcaccggccctgcggcaattgcgatacctgtattaccccg
gtgcaaacctgggacggcaccgaggcggcacgtaaggcgttgagctgtgtctaccgcacc
gggcaacgtttcggcgttaatcaccttatcgatgtgcttctggggaaaagcacggccaaa
gtgcagcaatttcatcaccaaacactgagtacttatgccatagggagtgagctggaaagc
aatcagtggcattctgtgttccgccagttagtgtcgcgcggttatatatatgccgatatg
gatagtttcggcgcctttaagctgacggagaaatgccgccctttattgcgcggcgaacaa
agcattgaactgcgcaaagataacaccggaaagatgaaaaagaaaaaagcatcaaaatca
gcagctgttcctgaatatgcccagcccttatgggaagcgctcagggcgttaaggaaacag
ctggcggatgagcatggtgttcccgcttatacggtttttcatgacagtactatgatggaa
atgatcagtatccgccctgagaatagggagcagctgttaaacatcagcggtgtcggggtc
agtaaattagataagtacggcgagcagtttttggcggttattgccgagcataatcaacaa
taa
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