Thalassomonas actiniarum: SG35_012730
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Entry
SG35_012730 CDS
T08826
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tact
Thalassomonas actiniarum
Pathway
tact03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tact00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SG35_012730 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tact03400
]
SG35_012730 (recD)
Enzymes [BR:
tact01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SG35_012730 (recD)
DNA repair and recombination proteins [BR:
tact03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SG35_012730 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
RecD_N
SH3_13
Helicase_RecD
UvrD_C
PhoH
AAA_22
SLFN-g3_helicase
DEAD
FtsK_SpoIIIE
AAA_25
DUF87
nSTAND3
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
WDE01413
UniProt:
A0AAE9YV59
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All DBs
Position
2938139..2940073
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AA seq
644 aa
AA seq
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MLDNSGANADPNLARDSSKDKNIPVYGSFARAKAQLAALEPIDYFFARELCQGLGFEPQL
FHLLLALSESLRNGHTCLPLESIAGQCFGFASDDEGLVSHHGFIFAEQESLHQLLSALAL
APDQDQAIVYYRQKLYFRRYFTFEGELAGFIRSKSAGAFAAFEPDEIKACLDTLFPASAN
EEGAGEIDWQHIAVANAVNKSFSVIAGGPGTGKTYTVTKLLAALIMLEQARSPQKPLTIA
LVAPTGKAAQRLSESIAKAVKGFRGLIPEKVLAAIPEQALTVHRLLGVIPNQVNFRHHRD
NLLQADLVLIDEVSMVDLALMTRVFRALPQHSKVILLGDADQLPSVAAGSVLNDVAPRPH
PGFSPKNLAYLEQVTGCRQLPKAKGGKGAADHISYLVKSRRFDGQGGIGRLAAAVIAGQS
SESWQLLTRAQEEGDEQLSLLPGELSAWLPRLVEQYYLGLFHCDQVGEAFSLLGRFRILC
AMRKGEYGVENINQLIKQYLADKGLANASGRLYHGMPVMISENDYRLGLYNGDIGMIWRN
DKGHLMAVFEDAELGFKWLMPSRLPQFETVYAMTIHKTQGSEFDHVAMLLPGQTDNKLLS
RELLYTGITRAKSRLSIASKANVWSHGVEGRVKRFSGLNLELSE
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcttgataatagcggggctaacgctgatcccaaccttgctcgtgacagctccaaggat
aaaaacataccggtttatggctcttttgcccgggcaaaggcacaacttgccgccctggag
ccgatagattatttttttgcccgggagctatgccagggcctgggttttgagccccagttg
tttcatctgttgctggcgttaagtgaaagtttacgaaatggccatacctgtttaccgctg
gaaagtatcgccgggcagtgtttcggctttgccagcgatgatgagggcctggtgagccat
catggttttatttttgccgagcaagaaagtttgcatcaattgttatcggcattggcactg
gcgccggatcaagatcaggcgatagtgtattacaggcaaaaactctactttcgccgctat
ttcacctttgaaggcgaactggcgggttttatccgcagtaaatctgccggggcatttgct
gcttttgagcccgatgagatcaaagcctgcctcgatacattatttcccgcaagcgccaat
gaagaaggggcgggggaaatagactggcaacatatcgccgtggccaatgccgtcaataaa
agtttcagtgttattgccggcggtcccggtaccggaaaaacctatacggtgaccaaattg
ctggcggccttgatcatgcttgaacaggcgcgttcaccgcaaaagccgttaactattgcc
ttagtggcgccaaccggcaaggcggcacagcgtttgtccgagtctattgccaaggcggtg
aagggttttcggggattgatcccagaaaaagtgttggcggccattccagagcaggccctt
accgtgcatcgtttgctcggggtgatcccgaaccaggtgaattttcgccaccacagggac
aatttactgcaggcagacctggtgctgatagatgaggtttccatggtggatctggcgttg
atgacccgggtttttcgggcactgccgcagcacagcaaagtgattttgctcggtgatgcc
gatcaattgccttcggtagccgccggcagcgtgcttaacgatgttgcccccaggccacat
ccgggattttcccccaagaacctggcctaccttgaacaggtgaccggttgccgccagctg
cctaaagctaaaggcggcaagggggcagccgatcatatcagctacctggtgaaaagccgc
cgttttgacggccaggggggcataggacgcctggcggcggcagtgatcgccgggcaaagc
agtgaaagctggcagttattgacccgggcacaggaagaaggtgatgagcagctgagcctg
ctacccggcgagctatcagcctggttaccccggttggtggagcaatattatctggggctt
tttcattgcgaccaggttggtgaggccttttcactgctagggcgttttaggattttgtgc
gccatgcgcaagggagagtatggcgttgaaaacattaaccagctgatcaaacaatacctg
gcggataaggggctggccaatgcctccgggcgtttataccatggtatgccggtgatgatc
agtgaaaatgattatcgtctcgggctttataatggcgatatcggcatgatctggcgtaat
gacaaggggcatttgatggcagtatttgaagatgccgagcttggctttaaatggctgatg
ccgtccaggctgccccagtttgaaactgtctatgccatgactatacataaaacccagggc
agtgaatttgatcatgttgccatgttattgccggggcaaacggataataaactgctgagc
cgggaattattatatacgggcattacccgggccaagtcccggctgagtattgccagtaaa
gccaatgtctggagccatggcgtggaagggcgggtaaaacgcttttccggattaaacctg
gagctgagtgagtag
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