Thalassomonas actiniarum: SG35_016935
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Entry
SG35_016935 CDS
T08826
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
tact
Thalassomonas actiniarum
Pathway
tact02020
Two-component system
tact02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tact00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SG35_016935
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SG35_016935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
tact02022
]
SG35_016935
Two-component system [BR:
tact02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
SG35_016935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
FleQ
HTH_8
AAA_2
AAA
DUF3818
AAA_3
PDE8A_N
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WDD97038
UniProt:
A0AAE9YMK8
LinkDB
All DBs
Position
3899796..3901178
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AA seq
460 aa
AA seq
DB search
MGNNKVIKAEVTAEKQKILIVDDDPSLLRLLGIRLSAAGYAVESAANAKIALGILESFHP
QMVISDLRMEGMDGMALFEQIRKQHPNMPVVIMTAHGTIPDAINATKQGVFSFLTKPFES
QELLETVQQAIRLQPTSQTTQAKQQLWREKIISRSTVMESLLQQTQQVARSDFPLLIHSQ
SGTGKELLAQAIHQASHRHQKPFTAINCAAIPEQLLESELFGHSKGAFTGAEKNHTGLFQ
ATDGGTLFLDEIGDMPMSFQVKLLRALQEKEVRPVGSTQSVKVDVRIISATHKNLQQAII
DNTFREDLYYRLNVVELELPPLSQRREDIPLLAQHFLNHCTQQVHQDIKGFSGEAMELLI
SAPWPGNIRQLQNVVEQSVALSTEVLISANLVRNALRDKTTQLPSFVEARDQFERDYLAK
LLKLTAGNVSQAARIAQRNRTEFYKLLNRHHLTAEAFREE
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgggcaataacaaggtgatcaaagcggaggtaaccgcagaaaaacaaaaaatactgatt
gtcgatgacgatcccagcctgctcaggttgctggggatccgcttgtctgccgccggttat
gcggttgagtccgccgccaatgccaaaatcgccttaggcatactggaaagttttcacccg
caaatggtgatcagcgatctgcgcatggaaggcatggacggcatggcattatttgaacag
atacgcaaacaacaccccaatatgcctgtggtgatcatgaccgcccacggcactatcccc
gatgccattaacgccaccaagcaaggggtattcagctttttaaccaaaccgtttgaaagc
caggaattgctggaaaccgtacagcaggcgattaggctgcagccgacatcgcaaaccacc
caagcaaaacagcagttgtggcgggaaaaaatcatcagccgcagcacggtaatggaatcc
ttactgcagcaaacccagcaagtggcgcgcagtgactttccccttttgatccacagccaa
agcggtaccggtaaggaattgctggcccaggcgattcaccaggccagccatcgccaccaa
aaaccttttaccgccattaactgcgccgccattcccgagcaattgctggagtcggaatta
ttcggtcacagtaagggcgcctttaccggcgcagaaaaaaaccataccggtttattccag
gccaccgacggcggtaccttatttttagatgaaatcggcgatatgccgatgagtttccag
gtgaaactgctgcgcgccctgcaggaaaaagaagtccggcccgtcggcagcacccagtcg
gtgaaagttgatgtccgcatcatttccgccacccataaaaatctgcagcaggccattatc
gataacacttttcgggaagatctctattaccgcctgaacgtagtagagctggaattgccg
ccgctgtcccagcgccgtgaagatattccgctgctggcacagcattttcttaatcactgc
acccagcaggtacaccaggatatcaaaggcttttcaggcgaagcgatggagcttttgatc
tctgctccctggcccggcaatatccgccagttgcaaaatgtagtggagcaaagtgtggcg
ttaagcaccgaagtgctgatcagcgccaatttagtgcgcaatgccctcagggataaaacc
acccaactgccctccttcgttgaagccagggatcaatttgaacgcgattacctggcaaaa
ctgttaaaactcaccgcgggtaatgtttcccaggcggcgagaattgcccagcgaaaccgc
accgagttttataagctgttaaaccgccatcacctgacggcagaagcttttcgggaagaa
tag
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