Thalassomonas actiniarum: SG35_017640
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Entry
SG35_017640 CDS
T08826
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
tact
Thalassomonas actiniarum
Pathway
tact03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tact00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SG35_017640 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tact03400
]
SG35_017640 (uvrB)
DNA repair and recombination proteins [BR:
tact03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SG35_017640 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SG35_017640 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF87
Ish1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WDE01925
UniProt:
A0AAE9YWZ5
LinkDB
All DBs
Position
complement(4068704..4070719)
Genome browser
AA seq
671 aa
AA seq
DB search
MMKSLELVSDYTPGGDQPGAIKQLLEGVDAGLAHQTLLGVTGSGKTFTVANVIAQLNRPT
MMLAPNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNEHIE
QMRLSATKALLERRDVIIVASVSAIYGLGDPDSYLKMMLHLRVGDIINQRDILRRLAELQ
YTRNDMAFQRATYRVRGDVIDIFPAESDRLALRVELFDEEIERISQFDPLTGSVEQVLAR
VTVYPKTHYATPREKILAAVEQIKIELKHRSQQLKDNNKLVEEQRVVQRTQFDIEMMTEL
GYCSGIENYSRYLSGREPGEAPPTLFDYLPDDGLLIIDESHVTVPQIGAMYKGDRSRKEN
LVEYGFRLPSALDNRPMKFDEFEALAPQTIYVSATPSNYEVDKSGDEIAEQVVRPTGLLD
PQIEVRPVETQVDDLLSEINKRVAINERVLATTLTKRMAEDLTDYLDEHGIKTRYLHSDV
DTVERVEIIRDFRLGKFDVLIGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNENGMAILYAARITGSMKKAIEETERRREKQHQFNLDNNIVPRGVKRKITDVMDVD
TANFEPLTEQEGERLVAEQKAGYKALSTQEIDEKVKQLENTMYQHAQNLEFEQAAAIRDE
IAKLREQQLAT
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
ctgatgaagtctttagaactcgtatctgattataccccggggggagatcagcccggagca
attaagcagttgcttgaaggcgtagatgccggtttggcccatcagactttactcggggtg
accggctcgggtaaaacctttaccgtggccaatgttattgcccaattgaaccgcccgacc
atgatgctggcgccgaataaaaccttggcggcccagctttacggggaaatgaaagagttc
ttccctaataatgccgttgagtattttgtttcttattatgattattatcagcctgaagcc
tatgttccgaccacagatacttttattgaaaaagatgcctcggttaatgaacatatagag
cagatgcgcttgtcggccaccaaagccttattggaacgccgtgatgttattatcgtcgct
tctgtttcggccatttatggtttgggtgatcccgactcctacctgaagatgatgttgcac
ctgcgggtgggagatattattaaccagcgcgatattctgcgccggctagccgagctgcaa
tatacccgtaatgatatggccttccagcgggcaacctaccgggtgcgcggtgatgtgatt
gatatttttccggcagaatctgatcgcctggcgttaagggttgagctttttgatgaagaa
atcgaacgtatcagccagtttgatcccttaaccggcagtgtcgagcaggtgctggcccgg
gtgacggtttaccctaaaacccactatgccaccccgagggagaaaatcctggcggcggtt
gagcaaatcaagatcgagcttaaacacagatcccagcagcttaaagacaacaataagctg
gtggaagagcaaagggtggtgcagcgtacccagtttgatattgaaatgatgaccgagctc
ggctactgctcaggcatcgaaaactattcccgctatttatccggacgggagccgggagaa
gcgccgccgaccctgttcgactatttacccgacgacggtttgctgatcatagatgagtcc
catgttaccgtgccgcaaatcggcgccatgtataaaggggacagatcccgtaaggaaaac
ctggtggaatatggtttccgtctgccgtcggcactggataaccggccgatgaagtttgat
gaatttgaggcactggcgccgcaaaccatttatgtctcggcgaccccgagtaattatgaa
gttgataagtccggtgatgaaattgccgagcaggtggtcaggcccacaggtttattggat
ccgcaaattgaagtacgcccggtggaaacccaggtggatgacttgttgtcggaaatcaat
aagcgggtcgcgataaatgagcgggtactggcaaccaccttaaccaaacgcatggcagaa
gatctcaccgattacctggacgagcacggcatcaaaacccgttatctgcattcggatgtt
gataccgtcgagcgggtggaaattatccgtgatttccgtttagggaaatttgatgtcttg
atcggcattaacttgctgcgagaaggcctggatatgccggaagtttccctggtggcgatc
ctcgatgccgacaaggaaggtttcctgcgctctgagcgctcccttattcagaccataggc
cgcgccgcccgtaatgagaacggtatggccattttatatgccgcccgtattaccggctcg
atgaaaaaagccatcgaagaaaccgagcgccgccgggaaaaacaacatcagtttaacctg
gataataatattgtgccgcgcggggtaaaacggaaaattaccgatgtgatggatgtcgat
accgccaactttgagccgttaaccgaacaagaaggtgagcgtctggtggcggagcagaaa
gccggttataaagccttatccacccaggaaattgatgagaaggttaagcagcttgaaaac
actatgtaccaacatgcacaaaacttagagtttgaacaagctgccgcaatcagggacgaa
attgctaagctcagggagcagcaattggctacttag
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