Thalassomonas actiniarum: SG35_020540
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Entry
SG35_020540 CDS
T08826
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tact
Thalassomonas actiniarum
Pathway
tact03030
DNA replication
tact03430
Mismatch repair
tact03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tact00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SG35_020540 (dnaE)
03430 Mismatch repair
SG35_020540 (dnaE)
03440 Homologous recombination
SG35_020540 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tact03032
]
SG35_020540 (dnaE)
03400 DNA repair and recombination proteins [BR:
tact03400
]
SG35_020540 (dnaE)
Enzymes [BR:
tact01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SG35_020540 (dnaE)
DNA replication proteins [BR:
tact03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SG35_020540 (dnaE)
DNA repair and recombination proteins [BR:
tact03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SG35_020540 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WDD97678
UniProt:
A0AAE9YNP5
LinkDB
All DBs
Position
complement(4728366..4731878)
Genome browser
AA seq
1170 aa
AA seq
DB search
MSELSPEAPAQVEPKFVHLRIHSDFSMCDGLKKVKPIIAKATELNLPALALTDQTNLCGL
VKFYHGTHGAGIKPIIGADFWVKSDELEDELSRLVILSADNTGYKNLTELISKAYLRGHI
QGRAVIDKAWLIEHAQGLILLSGGREGDIGKALLKGNQEMVVEMVAFYQQYFADHFYLEL
IRTGRDDEENYLHQAVRLASEHMLPVVATNEVMFLSPEDFEAHEIRVAIHDGFTLDDKRR
PKRYSPEQYLRSEEEMCELFADIPEALANSVEIAKRCNTTVRLGEYVLPDFPTEGLSIED
YLVKVSEEGLQERLEFLFDKDAPDFAEKRKPYDERLAVELEVVNNMGFPGYFLIVMEFIQ
WSKDNNIPVGPGRGSGAGSLVAYAQKITDLDPLEYDLLFERFLNPERVSMPDFDIDFCMD
RRDEVIDHVAELYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPGDPGM
TLAKAFEVEPKLPEVYAQDSEVKDLIDMCRILEGTTRNAGKHAGGVVISPTTITDFAPLY
CDEEGNNPVTQFDKNDVEDAGLVKFDFLGLRTLTILQWAIEMADEKLLKQGKEPIDIASI
DLEDKRSFDLLLKSETTAVFQLESSGMKSLIAKLKPDCFEDIIALVALFRPGPLQSGMVD
NFIERKHGREEISYPDATWQHIDLKPILEPTYGIILYQEQVMQIAQVLAGYTLGGADMLR
RAMGKKKPEEMAKQRAGFEKGAVDRGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSY
QTLWMKAHYPAPFMAAVMSADMDNTDKIVTLADECDNMGIPLLPPDVNVGQYKFTVNDDN
EIVYGIGAIKGVGEGPIEAIISARQEGGPFVDLFDFCARLDLKKTNKRVLERLVKAGAMD
NLGPHRAALMASLPEAIKAAEQHAKAQALGQNDLFGLINEEPDDTRQAFKDVAPWPEEIW
LDGEKETLGLYLTGHPINRYLAEIKKYASGRLVTMQPTGKDRSAVAVGLVIGVRVLVNKR
GRRWALVTLDDKSARMDVRLFPDDYDRFAELLVNDAILVCSGQVSFDEYSGGNTMTGRDI
MTIADARENYVSSLDIQVVRSAIQDDFITKFTQVLSPYKDGTCPVRVFYQREEAQAMLEL
GVQWRVTPADMLLYELKTLLGDDNIALRFK
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacttagcccggaagctccagctcaggttgagcctaaatttgtccatttgcgc
atccacagtgacttttccatgtgtgatggcctgaaaaaagttaaacccattatcgccaaa
gcgacggagttaaacctgccggcactggcgctgacagatcaaaccaatttatgcgggctg
gtgaaattttatcacggcacccatggcgccggcattaaaccgatcatcggtgccgatttt
tgggtgaaaagtgatgagcttgaagatgagttatcacggctggtgatcctcagcgccgat
aataccggctataaaaacctgactgaactcatttctaaggcttacctgcgcggccatatc
caggggcgggcggtgatcgataaggcatggctgattgaacatgcccaggggctcatttta
ctttccggcggccgcgaaggagacataggcaaggcgctgcttaaaggcaaccaggaaatg
gtggtcgagatggtggccttttatcagcagtattttgccgatcatttttaccttgagctg
atacgtaccggccgtgatgatgaagagaactatttacatcaggcggtgcggttggccagt
gagcatatgcttcctgtggtggccaccaacgaggtgatgttcttatcgccggaagatttc
gaggcccatgaaattcgcgttgccatccatgatggttttaccctcgatgataaacggcgc
ccgaaacgttacagtccagagcagtatctgcgctctgaagaagagatgtgtgagcttttt
gccgatatccccgaagccctggcgaactcggtagaaattgccaaaaggtgtaataccaca
gtacgcctcggcgagtacgtgctgccggactttccaacagaaggtttatcgatagaagat
tatcttgttaaagtttccgaagaaggtttacaggaacggttagagtttctgtttgataaa
gatgctcccgattttgccgagaaacgtaaaccttacgatgaacgtttagcggtggagctg
gaagttgtcaataacatggggttcccaggttacttcttgatcgtaatggagtttatccag
tggagtaaggataataatattccggtggggccggggcggggctcaggtgcgggttcttta
gttgcttatgcccagaaaattactgacctggatccgcttgaatacgatttgcttttcgaa
cgtttcttgaaccctgagcgggtttcgatgccggattttgatatcgacttttgcatggac
cggcgtgatgaagttatcgaccatgttgccgagctttatggtcgtgacgcggtatcacaa
atcattactttcggtaccatggcggcgaaagccgttatccgggatgtcggccgggtattg
ggtcatccctatggttttgttgatcgtatctcgaaactgatcccgggggatcccggtatg
acattggcaaaagcctttgaagtggagccgaaattacccgaagtttacgcacaagacagc
gaagtgaaagacttaattgacatgtgccgtatcttggagggtaccacgagaaacgccggt
aagcatgcggggggggtggttatatcccccaccacgattacggatttcgcccctttatat
tgtgatgaagaaggtaataacccggttacccagttcgataaaaatgatgttgaagatgcc
ggcctggtaaaatttgactttctcggtttaagaacgctgacgatattgcaatgggcaata
gaaatggcggatgaaaaactgttaaagcaaggcaaagagccgattgatatcgccagtatc
gacctggaggacaaaagaagttttgacttgctattaaagtcggaaacaactgcggtattc
cagctggaatccagcggtatgaaatccctgatcgctaagctgaaaccggattgctttgaa
gatattatcgcgctggttgccctgttcagaccggggccgctgcaatcgggcatggttgat
aactttatcgaacgtaagcatggccgggaagaaatcagttacccggatgccacctggcag
catatcgacttaaaaccgattcttgaacctacctacggcattatcctgtatcaggagcag
gtgatgcagattgcccaggtgctggcgggttataccttaggcggcgcggacatgctgcgc
cgggccatgggtaagaaaaaaccggaggagatggccaagcaaagggcgggctttgaaaaa
ggtgccgtcgatcgcggtgttgacggcgagctggcgatgaaaattttcgacctggtggaa
aagtttgccggctatggttttaacaaatcccactctgccgcctatgccctggtgtcctat
caaaccctgtggatgaaagcccattatccggcgccctttatggcggcggttatgtcggcg
gatatggataataccgataaaatcgttaccctggcagatgaatgcgacaatatgggcatt
ccattgctgccgccggatgtcaatgtcggccagtataaatttaccgtcaatgacgataat
gaaatcgtctatggtatcggcgccatcaaaggggtaggggaaggcccgatcgaagctatt
attagtgcccgtcaagaaggcggtccttttgtcgacttatttgatttttgcgcccggctg
gatttgaaaaaaaccaataagcgggtactggaacgtctggtcaaagccggcgccatggat
aatctcggcccgcaccgggcggcgttgatggcgagcctgccggaagccattaaggcggcg
gagcaacatgccaaggcgcaggccctcgggcaaaacgatctttttggtttgatcaacgaa
gagccggacgatacccgccaggcctttaaagatgtggctccctggccggaagaaatctgg
cttgatggtgaaaaagaaactttaggtttatatttaaccgggcatccgattaaccgttac
ctggcggaaattaaaaaatatgcctccgggcgcctggtaaccatgcagcccaccggcaaa
gacagatcggcggtggcggtcggcctggtgatcggcgtgcgggtgctggtgaataagcgt
ggccggcgctgggccctggtaaccctggacgataagagtgcgcgcatggatgtccgcctg
tttcccgacgactatgatcgctttgccgaactgctggtaaacgatgctattttggtctgt
agcggacaggtcagctttgatgaatattcaggtggtaatacaatgaccggccgggatata
atgacgattgctgatgccagggaaaattacgtttcttctttggatattcaagttgttaga
tcggcgatacaagacgattttattacaaaatttactcaggtactgtctccctataaggac
ggtacctgtccggttcgggtattttaccagcgcgaagaggcgcaggcgatgctggaactt
ggcgtacagtggcgggttacaccggcggatatgttgttatacgagcttaaaactttgctt
ggcgatgacaacattgccctacgatttaaataa
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