Thalassomonas actiniarum: SG35_021245
Help
Entry
SG35_021245 CDS
T08826
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
tact
Thalassomonas actiniarum
Brite
KEGG Orthology (KO) [BR:
tact00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tact03009
]
SG35_021245 (dbpA)
Enzymes [BR:
tact01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SG35_021245 (dbpA)
Ribosome biogenesis [BR:
tact03009
]
Prokaryotic type
rRNA helicases
SG35_021245 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_30
AAA_19
AAA_22
adh_short
CbiA
CMS1
TsaE
Motif
Other DBs
NCBI-ProteinID:
WDD97802
UniProt:
A0AAE9YQP3
LinkDB
All DBs
Position
complement(4873403..4874791)
Genome browser
AA seq
462 aa
AA seq
DB search
MSSTAFSSLKLRIELQENLSSLGYQAMTAIQAQSLPDILAGKDVIAQGKTGSGKTAAFSL
GLLQQLNVKRFRIQSLVLCPTRELADQVAKEIRKLARTIHNIKVLTLCGGMPFGPQIGSL
EHGAHIVVGTPGRVEEHVRKGTLHLDNITTLVLDEADRMLEMGFAPSLDAIIEQAPKKRQ
NLLFSATYPAQIKAIAGAVMTDPVMVKVAATHDNSSISQHFYQIEDNRQRLEALRLLLLA
HNPASSVVFCNTKREVQEVADELHNYGFSVLALHGDLEQRDRDKALIRFANKSANILVAT
DVAARGLDIEALDAVFNYHIARDSEVHVHRIGRTGRAGSKGHAYSFYSDKESYKVALLED
YLDRTIAGESLPDAGVLANKPAAPLMTTLLIDGGKKQKLRPGDILGALTGEKGIRGEQVG
KINVFDFFAYVAVAKNAVTPALRKLEKGKMKGRNFRVRIVKD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgagtagtaccgctttttcatcccttaaattacgtatcgagctgcaagagaacttaagt
agcttaggttatcaggccatgacggcgatccaggcacagagtttacccgatatcctggcg
ggcaaagatgtcatcgcccaggggaaaaccggctcgggtaagacggcggcgttttccttg
gggttattgcagcagctgaatgttaagcgttttcgtatccagtcgctggtgttatgtccg
acccgggagctggcggatcaggtggcgaaagaaatccgtaaactggcacgtaccatacat
aatatcaaggtgttaaccttatgcggcggcatgccttttggcccgcaaataggctctttg
gagcacggcgcccatatcgtggtgggcacacccgggcgggtggaagagcatgtgcgcaaa
ggcactttgcatcttgataatattaccactttagtactcgatgaagccgaccgcatgctg
gaaatgggctttgcgccatccctggatgccatcattgaacaggcgccgaaaaaacgtcag
aatttattgttcagcgccacttacccggcgcagatcaaagccattgccggcgctgtgatg
acagatcccgtgatggtgaaagtagcggccactcatgataatagcagtatcagccagcac
ttttaccagatagaagataaccggcagcggctggaagccctgcgtttgctgctgctggcc
cataacccggcttcttccgtggtcttttgcaataccaaaagagaagtgcaggaagttgcg
gacgaactgcataattacggttttagcgtattggccttacacggggatttggagcaaaga
gacagggataaagctttgatccgttttgccaataaaagtgccaatatcctggtggctaca
gatgttgccgcccgcggactggatattgaagccctggatgcagtgtttaactatcatatt
gcccgcgacagtgaagtacatgtgcaccgtattggccgtaccggccgtgccggtagcaaa
ggccatgcttattctttttacagcgacaaggaaagttataaggtcgctttactggaagat
tacttagatcgcaccatagcaggcgaaagcttgcctgatgccggtgtgcttgccaataaa
ccggccgctcccctgatgacgactttgctgatcgacggcggcaagaaacaaaaattacgt
ccgggggatatcttaggggcattaaccggcgagaagggcattcgcggtgagcaggtgggg
aaaatcaatgtctttgatttttttgcctatgtcgcggtggccaaaaatgccgtaaccccg
gcgttgagaaagctggaaaaaggtaagatgaaagggcgcaacttcagggtacgtatcgtt
aaagattag
DBGET
integrated database retrieval system
