KEGG   Thalassomonas actiniarum: SG35_025055
Entry
SG35_025055       CDS       T08826                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system endonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
tact  Thalassomonas actiniarum
Brite
KEGG Orthology (KO) [BR:tact00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tact02048]
    SG35_025055 (hsdR)
Enzymes [BR:tact01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     SG35_025055 (hsdR)
Prokaryotic defense system [BR:tact02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   SG35_025055 (hsdR)
SSDB
Motif
Pfam: EcoEI_R_C ResIII SWI2_SNF2 Helicase_C HSDR_N DEAD DUF4145 AAA_19 UvrD-helicase DDHD AAA_11 PBP_dimer
Other DBs
NCBI-ProteinID: WDE02025
UniProt: A0AAF0C6G0
LinkDB
Position
5755990..5759505
AA seq 1171 aa
MTLGIINESNFGFLKQHDPIFFDLANAAERAFTSDPNTTLIKLRQLAEALAQDIASRVGI
EFDDNTTQANLLYKINKEISFEPVIRQLFHSLRIEGNKATHKFKTKHKEALDGLKLAREL
AIWFHRSFANLTQAFKPGAFILPEDPSLQLRTLQTKIQTLQNQLTENNEQLETNQNLALL
LAQEKEEYAVLAEQMDVEARTLAEQVKQHDALIKQQQTAFEQRLKELQTQLKQKDKEVEK
ARKQVSKKTKKASHNFELNEELTRILIDQQLEEAGWTVDTQELTWANGTRPEKNTHKAIA
EWPTELNGKKGRADYVLFNGLIPIAVVEAKKANTNVAGKIPQAERYAKGFKVTQLMTNAW
EVSGQTIAWPDEDSGHYMVPFVYSCNGRPFVKQSKEHSGTWFRDVRKPANIAKPLEQFHS
PAGLLDKLKRDKDEAEKLLQQEGFNYLGLRNYQQKAIAAVETALENNNSKCLLAMATGTG
KTRTIIGLMYRFLKAERFKRILFLVDRTALGTQAKDAFDEAKLEQNKTLSSIYNIADLGD
MKSEAETRVQVATVQAMVMRIYKSDTPPPIDEFDCIIVDEAHRGYVLDQEMTEGEITNRD
SSQYLSAYCRVLDYFDAVKIGLTATPAKHTSNIFGKPIYTYSYREAVAEDWLIDHEPPIR
YQTLLSQHGITFEKGETVSAINTQTGEVESAELEDEVKFDVDAFNRKVITPEFNKVICEQ
LVQELDPFGEEKTLIFCTRDIHADMVKSALDKAFKNLYGDEYKQAAVAKITGESDKVEQL
IRQYKNERFPNIAITVDLLTTGIDVPEINHLVFLRRVKSRILYEQMLGRATRRCDEIGKT
AFKIYDPVDIYHALEDLNTMKPISKDPNITLDQLVEELTDPEHLTKALATPGEKADTSHA
HDVLAQLSQKVMRVMRKAAKKAENKPELKEKLHQLEGVWGITANKLHQHLHTIGPQAAAA
FLHQHSGILKQLSEVRFLAGSDAMPIIYQGKDKFVSREQSYGAHEKPADYLLSFNEFIKE
NINQSAALSVVVSRPKDLTRAQLKEVKLMLDNAGFSEAHLQSAWRSSTNQDIAASIIGYI
RQAALGEALLPFEQRVQQAMQKLYQQHSWSPIQRKWLERLAKQLTFEVIIDKDFVNQRFA
QQGGAKQLDKILTNQLNTVIEELSDFLWVAS
NT seq 3516 nt   +upstreamnt  +downstreamnt
atgactttaggtattatcaatgaatcaaattttggctttctaaagcaacatgaccccata
ttctttgatttagccaatgcagctgaacgtgcttttaccagtgaccccaacaccacatta
attaaacttcgtcagctagccgaagcattagcacaagatatagcatcacgagtcggaata
gaatttgacgacaacacaactcaagctaatttgctgtataaaataaataaagaaatcagc
tttgagccggttatccggcaacttttccactccctgagaatagaaggcaataaagccacc
cacaaatttaaaaccaaacataaagaagcacttgacggtttaaagttagccagggaatta
gcaatttggtttcaccgctcatttgcaaatttaactcaggcatttaaacccggggcattt
atactgcctgaagatcccagcctgcaacttcgaacattacaaacaaaaatccagacgtta
caaaaccaattaactgaaaacaatgaacaacttgaaaccaatcaaaatttagccttatta
ctggcacaagaaaaagaagaatatgccgtactcgccgaacaaatggatgttgaggcacgc
accctcgccgaacaagtaaaacaacacgatgcgttaattaagcaacaacaaaccgcattc
gagcaaaggttaaaagaattacaaacccagttaaaacaaaaagataaagaagttgaaaaa
gctcgaaaacaagtcagtaaaaaaaccaaaaaagcaagccacaattttgagttaaatgaa
gaactaacacgcattcttatcgaccaacaattagaagaagctggctggacggttgatacc
caagaactaacctgggccaatggcacaagaccagaaaaaaacacccataaagcaatcgct
gagtggccaaccgagctaaatggtaaaaaaggcagggctgactacgtactgtttaacggc
ttaattcccattgccgtggttgaagccaaaaaagccaacaccaatgtagcaggtaaaatc
cctcaggcagagcggtacgctaaaggctttaaagtgacgcaattaatgacaaatgcctgg
gaagttagcggacaaacaattgcctggcccgatgaggatagcggacattacatggtgcca
tttgtctactcctgtaatggccgcccctttgttaaacaaagtaaagaacattcaggcacc
tggtttcgggacgtgcgcaaaccggccaatatagcaaaaccgctagagcagtttcactct
cctgcgggtttgctggataagctcaaacgagataaagacgaagcagagaagctgttacaa
caagaaggcttcaattatttggggttgcgtaactaccaacaaaaagccatagcagccgtt
gaaaccgcattagagaataataacagcaaatgcctgttagccatggcaacaggtacgggt
aaaaccagaaccatcataggcctgatgtaccgctttttaaaagcagagcgtttcaaacgc
atcctgttcttagtcgacagaactgccttaggcactcaggccaaagatgcctttgacgaa
gccaaactggaacagaataaaaccttatcttctatttacaatattgccgacctcggtgat
atgaaaagcgaagccgaaacccgggtgcaagtagcgacggtacaggccatggtgatgcga
atatacaaatcggatacgccaccaccgatagacgaatttgactgtattattgttgatgaa
gcccaccggggctatgtacttgatcaggagatgaccgaaggtgaaataaccaaccgggac
agcagccaatacttatctgcctactgccgagtattagactattttgatgccgtaaaaata
ggcttaaccgccacaccggcaaaacacaccagtaatattttcggcaagcccatttatacc
tacagttaccgagaagccgttgcagaagactggttaatagatcacgaaccgccaatacgt
taccaaaccctgctcagtcaacatggcattacctttgagaaaggggaaacggtatctgct
attaatacccaaaccggtgaagtagaaagcgcagaacttgaagatgaagtaaaatttgat
gtcgacgcctttaaccgcaaggttatcacccctgaatttaacaaagttatctgtgaacaa
ctggtacaagaactagatccgtttggcgaagaaaaaacccttattttttgtacccgcgac
atacatgccgacatggtcaaaagcgccctggataaagcctttaaaaacttgtacggcgac
gaatataaacaagctgcggtggctaaaatcaccggtgaaagtgataaggttgaacaactt
attcgccaatataaaaatgagcgttttcccaatatcgccattaccgttgacctgctcact
acaggcattgacgtacccgaaattaaccatttagtatttttacgccgggtaaaatcacgt
attttatatgaacaaatgctcggtcgtgccactcgtcgttgtgatgaaataggtaaaacc
gcgtttaaaatttacgacccggtagatatttatcacgcacttgaagatctcaatactatg
aaacccatcagcaaagatcccaacattaccctggatcaactggtggaagaattaaccgat
cccgagcatttaaccaaagccttagccacaccgggcgaaaaagccgataccagccatgcc
catgatgtattagcgcaactcagccaaaaagtgatgcgggtaatgcgcaaagcagccaaa
aaagccgagaacaaacctgaactcaaagaaaaattacaccaattagaaggtgtttggggc
atcacagccaacaagctccaccaacatctgcacaccataggccctcaagctgcagcagca
ttcctgcatcaacatagcggcatactcaaacaactgtcagaagtacgatttttagcgggc
tcagatgctatgccaattatttaccagggtaaagataagtttgttagccgcgaacaatct
tatggcgcccatgaaaaacccgctgattacctgctcagttttaatgaatttatcaaagag
aacatcaaccagtcagcggcactttccgtagtggtttcacgcccgaaagaccttacccgg
gcacagctcaaagaagtaaaattaatgctcgacaatgccggtttcagcgaggcccattta
caaagtgcctggcgcagcagtaccaatcaggatattgccgccagtattatcggttatatc
cgtcaggcagcattaggggaagcactgttaccttttgaacaaagggtacaacaggccatg
caaaagctttatcagcaacacagctggtcaccaatacagcgaaaatggctggagcgcctg
gccaaacagctgacctttgaagtgataatagacaaagactttgtgaaccagcgcttcgcc
cagcaaggcggtgctaaacagctagataaaatattaaccaaccaactcaataccgttatt
gaagagctaagcgacttcttatgggtagccagttaa

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