Thalassomonas actiniarum: SG35_027895
Help
Entry
SG35_027895 CDS
T08826
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tact
Thalassomonas actiniarum
Pathway
tact03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tact00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SG35_027895 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tact03019
]
SG35_027895 (recQ)
03400 DNA repair and recombination proteins [BR:
tact03400
]
SG35_027895 (recQ)
Enzymes [BR:
tact01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SG35_027895 (recQ)
Messenger RNA biogenesis [BR:
tact03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SG35_027895 (recQ)
DNA repair and recombination proteins [BR:
tact03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SG35_027895 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
WDD98998
UniProt:
A0AAE9YRC2
LinkDB
All DBs
Position
complement(6421750..6423675)
Genome browser
AA seq
641 aa
AA seq
DB search
MCCVIRLAFNCRDHKIILHGLCLSGVKCRHSHYKLALLLNIPSPDTIKEQLLATLKHHFG
YSSFRPGQEAIITNLLQNRDSLVLMPTGGGKSMCYQLPAVMLPGVTIVISPLIALMKDQV
DSLTHQGIPAAFVNSSLDQQTINDIFRRLGNNEIKLLYVAPERLTQGYFLQGLADLNISL
FAIDEAHCISQWGHDFRPAYTRLNCLKETFPHVPVMALTATADVTTRKDILDQLALREPY
IHLDSFDRPNIRYTLAEKYDGDQQVLGYIRKRGEESGIVYCNSRWQVEKLAKFLATKGVN
CAAYHAGMEVEIRNSVQEGFTKDNIQVVVATVAFGLGINKPNVRFVIHFEPPKTLEGYYQ
EIGRAGRDGLSAEALFLYDDQDIGRIKKRISQGENEQRVNVELQRFQAMTGFVEAQTCRR
QVVLNYFAEFTEQGCGNCDICLDPPSLFDATEAAQKVLSCVYRIKEQGDIQYVIEVLRGQ
STPKIMKATHDKVSTFGIGRTKTPGYWFSIIRQLIHLGYLQQDISRQSCLCLTQEARSVL
KAQEPLMLASPRLQQASYWQSKQQEKQYDRALFAKLRSLRKEIADAEDIAPFIVFNDATL
SELARIQPKSTRAMLNISGIGDVKLARYGKPFLDLIQEHTG
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtgttgtgttattagactagcatttaattgccgggatcataaaataattctccacgga
ttatgcctgtctggggtaaaatgccgccattctcattataaactggctttattgttgaac
atcccatcccctgacacgataaaagagcagttgcttgcgactttaaaacatcattttggt
tattcgtcgttccgccccgggcaggaagcgatcattaccaatttgctgcaaaaccgggac
agcctggtgctgatgccgaccggcggcggaaaatccatgtgttaccaactgcctgcggtg
atgctgccgggggtgaccatagtgatttctcccctgattgccttgatgaaagatcaggtg
gacagcctgacccaccagggaatccccgcggcctttgttaattccagtttggatcagcaa
accattaacgatattttccgtcgtttgggcaataatgaaattaaacttttatatgttgcc
ccagaacgcctgacccagggctatttcctgcaggggctggcagatttaaatatcagcttg
tttgccatagacgaagcccattgtatttcccagtgggggcatgacttcagaccggcttat
acccggctgaactgtttaaaagaaacatttccgcatgtgcctgtgatggcgttaaccgct
accgccgatgtcactacccgcaaagatattcttgaccagctggcgctgcgggagccctat
attcatctggacagctttgaccgtcccaatatccgttataccctggcggaaaaatatgat
ggcgaccagcaagtcctcggttatattcgcaaaagaggcgaagagtccggtatcgtttat
tgcaacagccgctggcaggtggaaaaacttgcgaagtttttagccactaaaggggtgaat
tgtgccgcttaccatgcgggtatggaagtggagatccgcaattcggtccaggaaggtttt
accaaagacaacatccaggtggtggtggcgacggtagcctttggtttggggatcaataag
ccgaatgtgcgttttgtgatccattttgagccgccgaaaaccctggaaggctattatcag
gagattggccgcgccggccgggacggtttgtcggcggaggcactgtttttatatgatgat
caggatatcggccgcattaaaaagcgtatttcccagggggaaaacgagcaaagggtcaat
gtcgagttgcagcgctttcaggcaatgaccggttttgtggaggcgcaaacctgtcgccgc
caggtggtgcttaactattttgccgaatttaccgagcagggttgcggcaactgtgatatt
tgcctggatccccccagtttgtttgatgccaccgaagcggcgcaaaaagtgttgtcttgc
gtttaccgcattaaagagcaaggggacattcaatatgtgatcgaggttttgcgcgggcaa
agtaccccgaaaatcatgaaagcaacccatgacaaagtctccacttttggcatcggccgg
accaagaccccgggttactggttttccattatccgccagctgatccacctgggttacctg
cagcaggatatttcccggcaatcttgtctgtgtctaacacaagaggcgcgctcggtatta
aaagcgcaggagcctttgatgctggccagtccgagattgcagcaggccagttactggcaa
agtaaacagcaagaaaaacaatacgatcgtgcgctatttgccaagctgcgctcattacgt
aaagagattgccgatgccgaagatattgcaccctttattgtctttaatgacgccaccttg
tctgagctggcccgtatccagcccaaaagcacccgtgccatgctcaatatcagcggtatc
ggggatgttaaactggcccgttacggcaagcctttcttagatctgatccaggaacatacc
ggttaa
DBGET
integrated database retrieval system
