Thalassomonas actiniarum: SG35_027920
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Entry
SG35_027920 CDS
T08826
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tact
Thalassomonas actiniarum
Pathway
tact03420
Nucleotide excision repair
tact03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tact00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SG35_027920 (uvrD)
03430 Mismatch repair
SG35_027920 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tact03400
]
SG35_027920 (uvrD)
Enzymes [BR:
tact01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SG35_027920 (uvrD)
DNA repair and recombination proteins [BR:
tact03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SG35_027920 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SG35_027920 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
PhoH
DUF7432
DEAD
nSTAND_NTPase5
ResIII
Motif
Other DBs
NCBI-ProteinID:
WDD99003
UniProt:
A0AAE9YRL6
LinkDB
All DBs
Position
complement(6428594..6430771)
Genome browser
AA seq
725 aa
AA seq
DB search
MDVSELLDGLNDQQREIVAAPLQNMLVLAGAGSGKTRVLVQRIAWLMKVEQVSSHAVLAV
TFTNKAAAEMRSRVEQVVDGNVHGMWVGTFHGLAHRLLRMHFQEANLPQAFQVLDSDDQL
RLVKRIIRSLNLDEKRWPAKQAQWYINGKKDEGIRPRHIEAHFDPTEQTFVQIYSAYQQA
CDRAGLVDFAELLLRAHELWLNNPVLLSHYQQRFSHILVDEFQDTNAIQYAWLTMLGKAR
SNVMIVGDDDQSIYGWRGAKIENIQRFLKDFEQAKTIRLEQNYRSTANILNAANKLIANN
NNRLGKELWTQDDAGEKISIYTAFNEIDEARFIAGRIEAWRQDNGSLDQVAILYRSNAQS
RLLEEALLQAQLPYRIYGGLRFFERQEIKDALAYMRLINNRDDDAAFERIINTPTRGIGN
QTLAIVRDAAKSLETTLWQACQQMLSSGQLKGRSAKTIGLFIELIDSLEDDSCNLDLDQQ
ANFVISNSGLKAMYQAEKGERAEARIENLNELVTACQTFEMDPELEDEQSQLTAFLTHAA
LESGESQADDYEAAVQLMTMHSAKGLEFPLVFIAGIEEGMFPSQQSVEDISRLEEERRLC
YVGMTRAMNKLYLCHAESRRLYGQEKYHKPSRFIRELPESCVEEIRLQSQVSRPATTGRF
SSTFTTESFENTGFTLGQRVEHSKFGEGVVLNYEGSGAQSRIQVNFDGLGSKWLVVAYAN
LQPIT
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttccgagttacttgatggcttaaacgaccagcagcgggaaatcgtcgctgcc
cctttgcaaaatatgttggtgctggccggcgccggtagcggtaaaacccgggtgctggta
cagcgtattgcctggctgatgaaagtcgagcaagtatcttcccatgcggtattggcagtt
acctttaccaataaggcggcggcagaaatgcgctcccgggtcgagcaggtggtcgacggc
aacgtccatggcatgtgggtgggtacttttcacggcctggcgcaccgcctgttaaggatg
cattttcaggaagccaacttaccccaggcctttcaggtgcttgactctgatgatcagctg
cgcctggtcaaacgtatcatacgttcattaaatttggatgaaaaacgctggcccgccaaa
caggcgcagtggtatatcaacggcaagaaagacgagggcatcaggccccggcatatcgag
gcccattttgatccgacggaacaaacctttgtccagatctacagtgcctatcagcaggcc
tgtgaccgcgccggtttggtggattttgccgaactgttattgcgggcccatgaactctgg
ctcaataatcccgtattgttaagtcattaccagcaaaggttttcccatatcctggtggac
gagttccaggataccaatgccatccagtacgcctggctaaccatgctgggcaaagcgcgc
agcaatgtcatgatagtcggcgatgacgaccagtccatttatggctggcgcggggcgaaa
atcgagaatattcagcggtttttaaaggatttcgagcaggcgaagactatacggctggag
cagaactaccgctcgaccgccaatattcttaatgccgccaataaactgattgccaataat
aataaccgtttaggtaaggagttatggacccaggacgatgccggcgaaaagatttctatc
tataccgcctttaatgaaatcgatgaagcacgttttattgccgggcgtatcgaagcgtgg
cgccaggataacggctctttggatcaggttgccattttataccgcagcaatgcccagtcc
cgtttattggaagaagccctgttgcaggcgcagctgccctatcgtatctatggcggttta
cgcttctttgaacgtcaggaaattaaagacgcgttggcgtatatgcgcttgatcaacaat
cgtgatgatgacgccgcctttgaacgcattatcaataccccgacccggggcataggcaat
caaactttggccatcgtccgcgacgccgccaagagcctggagaccaccttgtggcaagcc
tgtcagcaaatgctgagcagcggccagcttaagggacgcagtgcgaaaaccataggtctg
tttattgaattgatcgacagcctggaagatgactcctgcaacctggatctcgatcagcag
gccaattttgttatcagcaacagtggtttaaaagccatgtatcaggcggaaaaaggcgag
cgcgccgaagccaggatagaaaaccttaacgagctggtcaccgcctgtcagacctttgaa
atggatcccgagctggaagacgaacaaagccagctaacggcatttttaacccatgcggcg
ctggaatccggcgagtcccaggcggacgattatgaagccgcggtgcagctgatgaccatg
cactccgccaaaggcctggagttcccgctggtatttattgccggcattgaagaaggcatg
ttcccgtcccagcaatcggttgaagatatcagtcggctggaagaagagcgccgcctgtgt
tacgttggtatgacaagggccatgaacaaactatacttatgtcatgccgagagccgacga
ttatacgggcaagaaaaataccataagcccagtcgctttatcagggagttacccgagtct
tgcgttgaagaaattcgtttgcaaagccaggtttcccgtccggcaacaacaggacgtttt
tcatcgacctttaccacagagtcttttgaaaatacgggatttactttgggtcagcgggta
gagcacagtaagtttggcgaaggtgtggtgcttaattacgaaggcagcggcgcacaaagc
cgcatccaggtgaattttgacggtttgggcagtaaatggttggtagtggcctatgcgaat
ttacaaccaataacataa
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integrated database retrieval system
