Tachyglossus aculeatus (Australian echidna): 119919495
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Entry
119919495 CDS
T10703
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119919495 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tacu03019
]
119919495 (EDC4)
Messenger RNA biogenesis [BR:
tacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119919495 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
119919495 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EDC4L
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
NBCH_WD40
Pdc1_Ge1
Motif
Other DBs
NCBI-GeneID:
119919495
NCBI-ProteinID:
XP_038595875
LinkDB
All DBs
Position
X1:85489785..85512052
Genome browser
AA seq
1379 aa
AA seq
DB search
MASSCASIDIEDATQHLRDILKLDRQPGGSDLESQRASSSFNGDLNGLLMPETMSGEGAK
PGPRVGPMAILQEKQVICLSGDDSSTCIGISSKEVEIVASSDSSISSKARGSNKVKIQPV
AKYDWEQKYYYGNLIAVSNSFLAYAIRGASNGSAMVRVISLTTAERTLLKGFMGSVADLA
FAHLNSPYLACLDEAGSLFVWHLSLENGKIQEDIVVNIKRPEGTPLNHFRRIIWCPYILE
DSSEESSEEGSQTLALLHEDRAEVWDLEILQGNNSSWPMDITHIKEGFIVVKGHSMCLSE
GALSPDGTVLATASHDGYVKFWQIYIEGHDEARCLHEWKPHEGRPLSCLLFCDNHKKQDP
EIPFWRFLITGADQNRELKMWCTISWTCLQTIRFSPDLFSAGSVLPSLKVCLDLSAQYLI
LSDVQRKVLYVMELLQNQDEGRAYFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPAEE
EGDGLGAEGSQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPQQSPDVVAPLPPHAVCE
DFGFGEPLPELGSEGLDSDKGSGHSSQSDLRRISDLPLPSDFLSLTGEVKPKLMTPDAFM
TPSVVSLQQISVSPASSGSSLTAVTGLSSASASDTPIPRPPEDLALSTKLQLDSSLTLSS
SSSSLQTSPRSHGVLIPGLADKLTSKGPSQEVDPLVVPQTSPTRTRSPDVISSASTALSQ
DIPEIASEALSRGFGPTPTPPEGLEPDSMASAASALHLLSPRSRPVPDPTPQHGLVGSPG
EGDCRDSASLLEVTLTQEPGGADSQAWPAAPDITRETRSNLANSPRDDIQEKLKSSAFRH
AYPLLQHDSQDASAEQSDHDDELASLASAASSFGQVVIPRLPVKDWKTKPSPRTSPKLKR
KGKKEDGDTSQDPQLTENQVAEPPEEWLALVRGQQQQDMMELRQNQAELLQRLSDQLDSM
QSSLMGHMERVLDSRQEHEQRRLERALAEGQQHSGQLQEHLSQQLSQALSSAVAGRLERT
VREEMKKTVPQCVSRSLEPVTGQMSSSVVAKLTAVEGTLKESITKLVKSKNLTDAIARAT
ADALQGPMQATYREAFQSVVLPAFEKICQAMFQQINDSFKLGTQEYLQQLEGHMKSRKSR
EQEAREPVLAQLRALIVSVQGATDQMAATVTSSVRAEVQHQLHIAVGSMQESILAQVQRI
IKGEVSLAMKEQQAVVTSSIMQAMRSAAGTPIPAGHLDGQAQQAHILQLLQQGHLNQAFQ
QALTAADLNLVLYVCETVDPHQVFGQPPCPLSQPVLLSLIQQLSSDLGTRTELKISYLEE
AVMHLDNADPITRDHMGLVLTQVRQKLCQFLQAEPLNSLNKSARRLTIMLQGLASPNLN
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgtcctgcgccagcatcgacatcgaggacgccacgcagcacctgcgggacatc
ctcaagctggaccggcagccgggaggttcggatctggagagccagcgggcatccagctcc
ttcaatggggacctgaatggacttctgatgccagaaaccatgtctggagaaggggccaag
ccgggcccccgagtgggacccatggccatcctgcaggaaaagcaggtcatctgcctgtct
ggggatgacagctccacctgcattgggatctcgtcgaaggaggtggagatcgtggccagt
agtgactccagcatctccagcaaagcccgagggagcaacaaggtgaaaatccagccagtg
gcaaagtacgactgggagcagaaatattactatgggaacttgattgctgtgtccaattcc
tttctggcctatgctatcagaggtgccagcaatggctcagccatggtgcgagtgatcagc
ctcaccacagcagaacgaaccttgcttaagggcttcatgggcagcgtggcggacctggcc
tttgcccatcttaactcaccttacttggcgtgcctagatgaggcaggcagcctgtttgtg
tggcacctatccttggaaaatggcaagatacaagaggatattgtggtgaacatcaagcgg
cctgagggcaccccgctgaaccacttccgccggatcatctggtgcccgtacattctggag
gacagcagtgaggagagcagcgaggaaggcagccagacactggcactgctgcacgaggac
agggctgaggtctgggacctggaaatccttcaaggcaacaacagttcctggcccatggac
atcacgcacatcaaggagggctttatcgtggtgaagggtcacagcatgtgcctgagtgaa
ggagccctctcgcctgatggaacggttctcgccactgccagtcacgacggttacgttaag
ttttggcaaatctacattgaaggacacgatgaggcaaggtgtctccatgagtggaaaccc
catgaaggacgacccctctcctgcctcttgttctgcgacaatcacaagaagcaagatcct
gagatccccttctggcgattcctcatcacgggagctgaccagaaccgtgagctgaagatg
tggtgcaccatatcctggacctgtttgcagaccatccgcttctccccagacctgttcagc
gctgggagcgtgctccccagcctcaaggtctgcctggatctctcggcccagtatctgatc
ctcagcgatgtacagaggaaggtcctgtatgtgatggagctgctgcagaaccaggacgag
ggcagggcctacttcagctccatctccgagttcctgctcacccacccggtactgagcttt
ggcatccaggtggtgagccgctgccggctccggcacaccgaagtgctccctgctgaggag
gagggcgatggcctaggcgcagagggctcccagggggctggggcagtggaatcagccgcc
ggcgtgctcattaaactcttctgtgtccataccaaggccctgcaggacgtgcagatccgc
ttccagcctcagcagagccccgatgtggtggccccactgcccccccacgctgtatgtgag
gacttcggatttggagagcccctgccagaactgggctctgaagggctggactccgacaaa
ggttccgggcacagctctcaatctgatctgcggcgcatctccgacctgcccttgccctcc
gacttcctcagtctgaccggcgaagtcaagcccaagcttatgactcccgacgctttcatg
acaccgagcgtcgtctctctgcagcagatctccgtgtcccctgccagcagcggcagctct
ctgacagccgtgactggcttgagtagcgcttcggcctccgacactccgattcccaggcca
cctgaggacttggccctgagcaccaagctgcagttggacagcagcctgactcttagcagc
agcagcagcagtttgcaaaccagtccccgcagccacggcgtccttatccccggcctggcc
gacaagctgacctccaagggacccagccaggaggtggacccgctggtcgtgcctcagacc
tccccgactcggacccggtccccagatgtcatctcttcagcttccacagccctgtcccag
gacatccccgagatcgcttcggaggccctgtcccgcggcttcgggcctactccgacccca
cccgagggtctggagcccgacagcatggcctccgctgcctctgccctgcacctgctgtcc
ccgcggtcccggcctgtcccggaccccactccccagcacggcctggttgggagccccgga
gaaggggactgccgggacagcgcctcactactggaggtgacgctgacacaggagcctggg
ggggctgacagccaggcctggcctgctgcccccgacatcacccgcgagacccgcagcaac
ttggccaacagccccagagacgatatccaggagaagctcaagagctcggcttttcgacac
gcttacccgctgctgcagcatgacagtcaagacgctagtgctgagcagagtgaccacgat
gatgagttggctagcttggcctccgccgctagcagctttggccaggtggtcattcctcgg
ctgcctgtgaaggattggaagaccaagccttccccccgtacttctcccaagcttaaaagg
aagggcaagaaagaagatggggacacatctcaggacccccaattgactgaaaaccaggta
gcagagccccctgaggagtggctggccttagtgcgcgggcaacaacagcaggatatgatg
gagctgcgacagaaccaagcagagctgctgcagcggctgagtgaccaactggactcgatg
cagagttccctcatgggccatatggagagggtccttgattcgagacaggagcacgaacag
cggcggctggaacgggctttggctgaggggcaacagcacagcggacagctgcaggagcac
ctgtcgcagcagctgtcccaggctctttcctcggctgtggccggccggctggaacgtaca
gtgcgggaggagatgaagaagaccgtgccgcagtgtgtgtccaggagcctggagcctgtg
acaggccagatgagcagctcggtggtggccaagctgacggccgtggaaggcacactgaaa
gagagcatcaccaaactggtcaagtccaagaatctgacagatgccattgcccgagccaca
gctgatgcgctgcaggggcccatgcaagccacctatcgcgaggccttccagagtgtggtt
ctgccggcctttgagaagatctgtcaggccatgttccagcagatcaatgatagcttcaag
ctgggtacccaggagtacctgcaacagttggaggggcacatgaagagtcggaagagccgg
gagcaggaagcccgggagccggtcctggcacagctccgggcactgatcgtctccgtgcag
ggtgccaccgatcaaatggcagccaccgtcaccagcagcgtgcgggccgaggtgcagcac
cagctccacattgccgtgggcagcatgcaggagtcgatcctggcccaagtgcagcgcatc
atcaagggagaggtgagcctggccatgaaggagcagcaggcggtcgtcacgtccagtatc
atgcaggccatgcgctcggctgctgggactcctatcccggctggccacctggatggtcag
gcccagcaggcccacatcctgcagctgctccagcaaggccacctcaaccaagccttccag
caggccctgacggctgccgacttgaacctggtgctgtatgtgtgtgagacggtggacccc
catcaggtgtttggccagccaccttgtcccctgtcgcagcccgtcctgctgtccctcatc
cagcagctctcctccgatttaggcacccgcactgagctcaagataagctacctggaagag
gcagtaatgcacctggacaatgctgaccccatcacccgtgaccacatgggtttggtcctg
acgcaggtgcgccaaaagctgtgccagttcctgcaggctgagcccctcaactccttgaac
aagtcggcccgccgcctcaccatcatgttgcagggcctggcttcccccaatctcaactaa
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