Tachyglossus aculeatus (Australian echidna): 119919770
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Entry
119919770 CDS
T10703
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119919770 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tacu03019
]
119919770 (XAB2)
03041 Spliceosome [BR:
tacu03041
]
119919770 (XAB2)
Messenger RNA biogenesis [BR:
tacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119919770 (XAB2)
Spliceosome [BR:
tacu03041
]
Complex B
Other components
Prp19-related factors
119919770 (XAB2)
Complex C
119919770 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_2
TPR_12
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_16
RPN7
TPR_NPHP3
TPR_1
CCDC84
Motif
Other DBs
NCBI-GeneID:
119919770
NCBI-ProteinID:
XP_038596385
LinkDB
All DBs
Position
X1:117122194..117134877
Genome browser
AA seq
872 aa
AA seq
DB search
MPEIPASEPEGGVKARVKVGAAPRPERTDIFFEEEDLQYEEEILRNPFSVKCWFRYIEFK
QSAPRHVLNLLYERALKELPGSYKLWYHYLKARRGQVKSRCVTDPAYEDVNNCHERALVF
MHKMPRLWLDYCQFLMEQGLITRTRRTFDRALRALPITQHPRIWPLYLRFVRLHPLPETA
VRVYRRFLKLSPESAEEYIEYLRSIDRLDEAAQRLATVVNDERFISKEGKSNYQLWHELC
DLISQNPDKVQSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIQT
VVTVRDFTQVFDSYAQFEESMIAAKMETTSELGREEEDDVDLELRLARFEQLIGRRPLLL
NSVLLRQNPHHVHEWHKRVKLHEGQPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFY
EDNGQLEDARTILEKATKVNFKQVDELASVWCECGEMELRHENYDQALRLLRKATALPSR
RAEYFDSSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYA
MFLEEHSYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALD
GCPPKYAKTLYLLYARLEEEWGLARHAMAVYERATRAVEPGEQHDMFNIYIKRAAEIYGV
TYTRSIYQKAIEVLSDEHAREMCLRFADMECKLGEIDRARAIYSYCSQICDPRTTGAFWQ
TWKDFEIRHGNEDTIREMLRIRRSVQATYNTQVNFMASQMLKVYSNATGTVSDLAPGQSG
LDDMKLLEQRAEQLAAEAERDRAPRTQGKILFVRSDASRHELAELAQQANPEEIQLGEEE
DEEEEGEELQPNEVQLEQQSIPAAVFGGLKED
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgccggagatcccggcctccgagccggaaggcggagtcaaagccagggtcaaggtcgga
gctgcccctcgccccgagcggaccgacatcttcttcgaagaagaggatctgcagtatgag
gaggagatcctgcggaaccccttttccgtcaagtgctggttccgctacatcgagtttaag
cagagtgccccccgccacgtgctgaacctgctgtacgagcgggccctcaaggagctgccg
ggcagttacaagctgtggtatcactacctgaaggcccggcgaggccaggtgaagtcccgc
tgtgtgaccgacccagcctatgaagacgtcaacaactgtcacgagcgagcactggtgttt
atgcacaagatgccacgcctgtggctggattactgccagttcctgatggagcagggcctc
atcacccggacccgccgcaccttcgaccgggctctgcgggccctgcccatcacccagcac
ccacgcatctggcccctctacttgcgcttcgtgcgcctgcacccgctgccggaaacggcc
gtgcgagtgtaccgccgcttcctcaagctgagccccgaaagcgcagaggaatacatcgag
tacctacgctccatcgaccggctggacgaggctgctcagcgcctggcaaccgtcgtcaat
gatgagcgcttcatctcaaaggagggcaaatccaactaccagctgtggcacgagttgtgt
gacctgatctcccagaacccagacaaggtccagtccctgaatgtcggtgccatcatccgc
gggggtctcactcgcttcaccgaccaactgggcaagctgtggtgctcgctggccgactac
tacatccgcagcggccacttcgagaaggcccgggacgtgtacgaagaggcgatccagacg
gtggtgaccgtgcgggacttcacccaggtgttcgacagctacgcccagtttgaggagagc
atgatcgccgccaagatggagaccacctccgagctggggcgggaggaagaggacgacgtg
gacctggagctgcggctggcccggtttgagcagctcatcggccggcggcccctgctgctc
aatagtgtcctgctgcgccagaacccgcaccacgtgcacgagtggcacaaacgcgtcaag
ctgcacgagggtcagccccgagagatcatcaacacctacaccgaggccgtgcagacggtg
gatcccttcaaggccacgggcaaaccccacacgctgtgggtggcctttgccaagttctac
gaggacaacgggcagctggaggatgcccgcaccatcctggagaaggccaccaaggtgaac
ttcaagcaggtggatgagctggccagcgtgtggtgtgagtgtggggagatggagctgagg
cacgagaactacgaccaggccctgcggctgttgcggaaagcgacggccctgccctcacgc
cgagccgagtactttgacagctcggagcccgtgcagaaccgtgtctacaagtctctgaag
gtgtggtctatgctggccgacctggaggagagcctgggcaccttccagtccaccaaggct
gtgtacgaccgcatcctggacctgcgcatcgccacgccccagatcgtcatcaactatgcc
atgttcctggaggagcacagctacttcgaggagagcttcaaggcctacgagcgcggcatc
tcgctgttcaagtggcccaacgtgtcggacatctggagcacgtacctgaccaagttcatc
gcccgctacgggggccgcaagctggagcgggcgcgggacctgtttgagcaggcgctggac
ggctgccctcccaaatacgccaagaccctgtacctgctgtatgcacggctggaggaggag
tggggcctggcccggcacgccatggccgtgtacgagcgggccacccgggccgtggagccc
ggcgagcagcacgacatgttcaacatctacatcaagcgggcggccgagatctacggcgtg
acctatacccgcagcatctaccagaaagccattgaggtgctctcagacgagcacgcccga
gagatgtgcctccgcttcgccgacatggagtgcaaactgggagagatcgaccgagcccgc
gccatctacagctactgttcccagatctgcgacccccgtacgacaggggcgttctggcag
acgtggaaggactttgagatccggcacgggaacgaagacacgatccgggagatgctgcgg
atccgccgcagcgtccaggccacgtacaacacccaagtcaacttcatggcctcccagatg
ctcaaggtttacagcaacgccacgggcaccgtgtctgacctggccccgggtcagagcgga
ctagacgacatgaagctgctggagcagagggccgagcagctagcagccgaggctgagcgg
gaccgagcccccaggacccagggcaagatcctctttgtcaggagtgacgcctcccgccac
gagctggccgagctggcccagcaagccaaccctgaggagattcaactaggggaggaggag
gatgaggaggaggaaggagaagagctgcagcccaatgaggtgcagctcgagcaacagagc
atcccggccgccgtctttggggggctcaaggaagactga
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