Tachyglossus aculeatus (Australian echidna): 119920977
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Entry
119920977 CDS
T10703
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu04140
Autophagy - animal
tacu04148
Efferocytosis
tacu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119920977 (VPS39)
04148 Efferocytosis
119920977 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119920977 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tacu04131
]
119920977 (VPS39)
Membrane trafficking [BR:
tacu04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
119920977 (VPS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
Beta-prop_RIG_2nd
DUF6365
Lgl_C
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
119920977
NCBI-ProteinID:
XP_038597187
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All DBs
Position
12:19147433..19198020
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AA seq
875 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVGCNRFEVTLEKSNK
NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHRASGE
EELRLCVAVRKKLQLYFWKDREFHELQGDLSVPDVPKSMAWCENSICVGFKRDYYLIRVD
GKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGTCTQKCALNWTDIPIAME
HQPPYIVAVLPRYVEIRTFEPRLLVQSIELQRPRFVTSGGSNIVYVASNHFVWRLLPVSI
ATQIQQLLQDKQFELALQLAEMKDDSDSEKLQQIHHIKNLFAFNLFCQKRFDESMQVFAK
LGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPALSGAELEKAHLALIDYLTQKRTHLVKKL
NDSDQQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE
SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTDNL
HLVFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRDSVLGFLEENFKGLAIPYLEHIIHVW
EETGADFHNRLVQLYCEKVQGLMKEYLRSLSADTAPVPAGDEGGELGESRQKLLAFLEIS
SCYDPGRLICDFPFDGLLEERALLLGRMGKHEPALFIYVHILGDTKMAERYCQKHYDQNQ
DGSRDVYLSLLRMYLSPPSVHCLGPIKLDLLEPQANPQAALQVLELYHGQLDTTKAIDLL
PANTQIGEIRVFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKV
CMVCKKKIGNSAFARYPNGVVVHYFCSKEVNAADT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgccttcgagccggtgcccatcctggagaagctgccgctgcagatcgactgc
ctggcggcctgggaggaatggcttctggttggcaccaagcaagggcacctcctcctctac
aggatccggaaggatgttggttgcaacaggtttgaagtgacactagagaaatccaacaag
aacttctccaagaagattcagcagatccatgtggtttcccagtttaagatcctggtcagt
ctcctggaaaataacatctacgtccacgacctcctgacctttcaacaaatcactaccgtg
tcgaaagccaaaggggcgtccctgttcacctgtgacctccagcaccgggcctcgggcgag
gaagagctgcgcctgtgtgtggccgtgaggaagaaactgcagctgtatttctggaaggat
cgggaattccacgagctgcagggagacctgagcgtcccagacgtgcccaagtccatggcc
tggtgtgagaactccatctgcgtgggcttcaagagggactattatctgatccgggtggac
gggaaggggtctatcaaagagctctttccaacagggaaacagctggagcccctggtcgcg
cccctggccgacggcaaagtggccgtcggccaagacgacctcaccgtggtgctcaacgag
gagggcacctgcacgcagaaatgcgccctgaactggacggacatccccatcgccatggag
caccaacctccgtacatcgtggccgtgctgccccgctacgtggagatccgcacgttcgag
ccccggctgctcgtgcagagcatcgagctgcagcggccccgcttcgtcacctccggaggc
tcaaacatcgtgtacgtggccagcaatcacttcgtgtggcggcttctccccgtctccatc
gccacccagatccagcagctgctgcaggacaagcagttcgaactggccctgcagctggcg
gaaatgaaggatgactcggacagcgagaagctgcagcagatccaccacatcaagaacctc
ttcgccttcaacctgttctgccagaagcgcttcgatgagtccatgcaggtgttcgccaag
ctcggcacagatcccacccacgtcatggggctgtatcccgatctcctccccaccgactac
cgcaagcagctgcagtatcccaatccgctgccggcgctctccggggcggagctggagaag
gctcacctggccctgatcgactatctgacccagaagaggactcacctggtgaagaagctg
aacgattcggatcagcagtccagcacctccccgctcatggagggcacgcccaccatcaag
tccaagaagaagctgctgcagatcatcgacaccaccctcctcaagtgctacctgcacacg
aacgtcgccctggtggcccccttgctgcgcctggagaacaatcactgccacatcgaggag
agcgagcacgtcctgaagaaggcccacaagtacagcgagctgatcatcctgtacgagaag
aaggggctgcacgagaaagctcttcaggtgctggtggaccagtctaagaaggccaactcc
ccgctgaagggccacgagagaaccgtgcagtacctgcagcatctaggcaccgacaacctc
cacctggtgttctcctactctgtgtgggtgctccgagatttcccggaagacgggctgaag
atattcaccgaagacctcccggaggtagaggccctgcctcgcgactcggtgctcggcttc
ctggaggaaaacttcaagggcctggccatcccgtacctggagcacatcatccacgtctgg
gaagagacgggagccgacttccacaaccgcctggtccagctgtactgtgagaaggtgcag
gggctgatgaaggaatacctccgctccctctccgcagacacggctccggtccccgcgggg
gacgaaggaggggagctgggagagtcccgccaaaaactcctcgctttcctggagatctcc
agctgctacgatcccggccggctcatctgcgacttcccgtttgacggcctcctggaggag
cgggctctcctcctggggcgcatggggaagcacgaacccgccctcttcatctacgtccac
atcctgggcgacacaaagatggccgaaaggtactgccagaaacactatgaccagaaccaa
gatggcagcagagacgtgtacctgtccttgctccggatgtacctgtcaccgcccagcgtc
cactgcctggggcccatcaagctggacctgctggagcctcaggccaaccctcaggccgcc
ctgcaagtcctggagttgtaccacggccaactggacaccaccaaggccatcgacctcctc
ccggccaacacgcagattggcgagatccgcgtcttcctggagaaggtcctggaggaaaac
gcccagaagaagcggttcaatcaagtgctgaagaacctcctccacgcggagttcctgagg
gtgcaggaggagcggatcttacatcagcaggtgaagtgcatcatcacggaggagaaagtg
tgcatggtgtgcaagaagaagattgggaacagcgctttcgccaggtaccccaacggcgtc
gtggtgcactacttctgctccaaagaggtcaacgcggccgacacctga
DBGET
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