Tachyglossus aculeatus (Australian echidna): 119921008
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Entry
119921008 CDS
T10703
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119921008 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tacu03400
]
119921008 (APEX1)
Enzymes [BR:
tacu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
119921008 (APEX1)
DNA repair and recombination proteins [BR:
tacu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
119921008 (APEX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
119921008
NCBI-ProteinID:
XP_038597247
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All DBs
Position
12:22551111..22552845
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AA seq
340 aa
AA seq
DB search
MPKRGKKEAKAAAAAAAEEEAGGGGEEVAAPEPKAKKGKKGAKEPKEPKEKPAAAAAAAS
GEAAGLYEDPPDRRSSASGRPATLKICSWNVDGLRAWVKKKGLDWVREEAPDILCLQETK
CAEGKLPPELKDLSDFPHRYWAAPNDKEGYSGVGLLSRQRPLTVSYGIGEEEHDQEGRVI
VAEFEAFVLVTVYVPNSGRGLVRLDYRQRWDQAFRRFLQAQAARKPLVLCGDLNVAHEEI
DLRNPKGNKKNAGFTAQERQGFGELLGAVDLADSFRHLYPAAAYAYTFWTYMMNARSKNV
GWRLDYFLLSRALLPSLCDSKIRSAALGSDHCPITLYLAL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgtgggaagaaggaggcgaaggcggcggcggcggcggcggcggaggaggag
gccggaggcggcggggaggaggtggccgccccagaacccaaggccaagaaggggaagaag
ggagccaaggagccaaaggagccgaaggagaaaccggcggcggcggcggcggcggcgtcg
ggtgaggctgcgggcctgtacgaggacccccccgaccggcgcagctccgccagcgggcgg
cccgccaccctcaaaatctgctcctggaatgtggacgggctccgcgcttgggtcaagaag
aaggggctggactgggtgcgtgaggaggccccggacatcctctgcctccaggagaccaag
tgcgccgagggcaagctgccgcccgagctgaaggacctgtcggatttcccccaccggtac
tgggcggctcccaacgacaaggaaggctatagcggcgtgggcctgctgtcccgccagcgc
ccgctcactgtttcctacggcatcggtgaggaggagcacgatcaggagggccgagtgatc
gtggcggagttcgaggccttcgtgctggtgaccgtctacgtgcccaactcgggccggggc
ctggtgcggctggactaccgtcagcgctgggaccaggccttccgccgcttccttcaggcg
caggcggcccgcaagcccctggtgctgtgcggagacctgaacgtggcgcacgaagagatc
gatctgcgcaaccccaagggcaacaagaagaacgcgggcttcacggcgcaggagcggcag
ggcttcggggagctgctgggggccgtggacctggccgacagcttccgacacctgtaccct
gcggccgcctacgcttacaccttctggacgtacatgatgaacgcacggagcaagaacgtg
ggctggcgcctcgactacttcctgctgtcccgggccctgctcccctccctgtgcgacagc
aagatccgctcggcggccctgggcagcgaccactgccccatcacgctctaccttgccctc
tga
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