Tachyglossus aculeatus (Australian echidna): 119922227
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Entry
119922227 CDS
T10703
Symbol
RXRB
Name
(RefSeq) LOW QUALITY PROTEIN: retinoic acid receptor RXR-beta
KO
K08525
retinoid X receptor beta
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03320
PPAR signaling pathway
tacu04659
Th17 cell differentiation
tacu04919
Thyroid hormone signaling pathway
tacu04920
Adipocytokine signaling pathway
tacu04928
Parathyroid hormone synthesis, secretion and action
tacu05200
Pathways in cancer
tacu05202
Transcriptional misregulation in cancer
tacu05207
Chemical carcinogenesis - receptor activation
tacu05216
Thyroid cancer
tacu05222
Small cell lung cancer
tacu05223
Non-small cell lung cancer
tacu05226
Gastric cancer
tacu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
119922227 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
119922227 (RXRB)
03320 PPAR signaling pathway
119922227 (RXRB)
04919 Thyroid hormone signaling pathway
119922227 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
119922227 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
119922227 (RXRB)
05202 Transcriptional misregulation in cancer
119922227 (RXRB)
05207 Chemical carcinogenesis - receptor activation
119922227 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
119922227 (RXRB)
05216 Thyroid cancer
119922227 (RXRB)
05222 Small cell lung cancer
119922227 (RXRB)
05223 Non-small cell lung cancer
119922227 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
119922227 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tacu03000
]
119922227 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tacu03310
]
119922227 (RXRB)
Transcription factors [BR:
tacu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
119922227 (RXRB)
Nuclear receptors [BR:
tacu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
119922227 (RXRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
119922227
NCBI-ProteinID:
XP_038598116
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MAAPGLHARPLRDEAAVGACAWRRRPPPDPILVRGPPAPPFTKMAPASSCFPPPFPVARH
LGNGQAEANFRPERGALTAAGPWGWASLPRCIVGRAPVSAGGGRGVRPPPPPPNPGTGSG
TGSGSGARRPRPPPPPRPRPRPPPPRPPPPPPAPRPGPGPPASGRGVPPSGCPRSPGPGP
AMTLGSPFPVISSSLGSPGPPPPPPLPPAYGPVNSPQINSTVSLPGLGGAEDVKPVLGVR
GLPCPPAAAGPPAAAAGKRLCAICGDRSSGKHYGVSSCEGCKGFFKRTIRKDLTYTCRDN
RDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKEKEGEGGEGAGAANEEMPVEK
ILEAELAVEQKTDQSLDAAPGTPGAGASPNDPVTNICQAADKQLFTLVEWAKRIPHFSSL
PLDDQVILLRAGWNELLIASFSHRSIAVNDGILLATGLHVHRNSAHSAGVGAIFDRVLTE
LVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNGSEVEQLREKVYASLEAYCKQRYPDQQ
GRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcctggccttcacgcccgccctttgagggacgaggccgccgtcggcgcatgc
gcgtggaggcgacgccccccccccgaccccatcttggtgcggggaccgccggccccgccc
tttaccaagatggcgccggcctcgtcctgtttcccccctccatttccggtcgcgcgccat
cttggaaacgggcaggccgaagccaacttccgcccggagcgaggggctttgacggcggcc
gggccttgggggtgggcctccctgccgcggtgcattgtgggccgggccccggtgtcggcg
ggaggaggacgcggcgtccgcccccccccccccccgccgaaccccggaaccggaagcgga
accggaagcggaagcggggctcgtcgcccccggcctccgcctccgccccggcctcggcct
cggcctcctccgcctcggcctcctccgcctcctccggcgccccggccgggccccggcccc
ccagcctcggggcggggggtccccccgtcggggtgcccccgctccccgggcccgggcccg
gccatgaccctgggctccccgttcccggtgatcagctcgtcgctggggtctccgggcccg
ccgcccccgcccccgctcccgcccgcctacggacccgtcaacagcccccagatcaactcg
acggtgagcctgccgggcctgggcggagcggaggacgtcaagcccgtgctgggcgtccgg
gggctcccgtgtccccccgccgcggccgggccgcccgccgccgccgccgggaagcgtctc
tgcgccatctgcggggaccgcagctcaggcaagcactacggcgtgtcgagctgcgagggc
tgcaagggcttcttcaagcgcaccatccgcaaggacctcacctacacctgccgcgacaac
cgcgactgcaccgtggacaagcgccagcgcaaccgctgccagtactgccgctaccagaaa
tgcctggccaccggcatgaagcgcgaggcggtgcaggaggagcgtcagcgggggaaggag
aaggagggggagggcggggagggcgccggggcggccaacgaggagatgcccgtcgagaag
atcctggaggctgagctggccgtcgagcagaagaccgaccagagcttggacgccgccccc
gggacccccggcgccggagccagccccaacgacccggtgacgaacatctgccaggcggcc
gacaagcagctgttcaccctggtggagtgggctaagcgcatcccgcacttctcctccctc
ccgctggacgaccaggtcatcctgctccgcgccggctggaacgagctactgatcgcctcc
ttctcccaccgctccatcgccgtcaacgacgggatcctcctggccaccggcctgcacgtc
caccgcaactcggcccactccgccggcgtgggcgccatcttcgaccgggtgctgacggaa
ctggtgtccaagatgcgggacatgcggatggacaagacggagctgggctgcctcagggcc
atcatcctcttcaaccccgacgccaagggcctgtcgaacgggagcgaggtggaacagctg
cgggagaaggtctacgcctcgctcgaggcctactgcaagcagcgctaccccgaccagcag
ggacggttcgccaagctgctcctccgcctgccggccctgcgctccatcggcctcaagtgc
ctggaacatttgttcttcttcaagctcatcggcgacacccccatcgacaccttcctcatg
gagatgctcgaagccccccaccagctggcctga
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