Tachyglossus aculeatus (Australian echidna): 119925522
Help
Entry
119925522 CDS
T10703
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119925522 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tacu04131
]
119925522 (VPS8)
Membrane trafficking [BR:
tacu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119925522 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
TPR_Vps41
Beta-prop_WDR36-Utp21_1st
Clathrin
zf-RING_Vps41
WD40_CDC20-Fz
zf_RING_Vps8_fungal
zf-RING_11
zf-RING_2
zf-RING_UBOX
Beta-prop_WDR5
zf-C3H2C3
GED
Beta-prop_WDR3_1st
DUF5770
Motif
Other DBs
NCBI-GeneID:
119925522
NCBI-ProteinID:
XP_038599704
LinkDB
All DBs
Position
1:complement(66438156..66805777)
Genome browser
AA seq
1459 aa
AA seq
DB search
MVGTENLPSKSLEFITGISEEERRKPLRILLEGKMENEPERERVESSACPLGPEDDLNRS
LGQEALLLKFAYIDLDKELELKPELIDDKEFDIPQVDTPPTLESILNETDDEDESFVLED
PSLLNIDTADTHSYDTSSVASSDSGDRTNLKRRKKLPDSFSLHGSVMRHSLLKGISAQIV
SAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGKDQNQALRLCLGSTTIGCQYGAISALS
INSDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAILHIKFTDDPTLAICNDSGG
SVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEPLHAKMELRDHPITQYSLLAMASLTKI
LVIGLKPSLKVWMTFPYGRMEPSSVPLLAWHFVALQNSVNPMLAFCRGDVVHFLLVKRDE
SGAIHVTKQKQLHLHYDLINFTWINSRTVVLLDSVEKLHVIDRQTQEELETVEISDVQLV
YNSSHFKSLATGGNVSQALALVGEKACYQSISSYSGQIFYLGTKSVHVMMLRSWRERVDH
MLKQDCLTEALALAWSFHEGKAKAVVGLTGDAGKRKAVVADRMVEILFHCADKALKKCPD
QGKIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQMYDKLSENSVAKGVFLECLEPYVLND
KLVGITAQVMKDLLVHFQDKKLMENVEALIVHMDITSLDIQKVVLMCWENHLYDAMIYVY
NRGMNEFISPMEKLFKVIAPPLAAGKSLTDEQVIMGNKLLVYISCCLAGRAYPLGDIPED
LVPLVKNQVFEFLIRLHSAEASPEEEIYPYVRTLLHFDTREFLNVLALTFEDFKNDKQAV
EYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAKPDNTLFVNRTLFDQVLEFLCSP
DDDSRHSERQQVLLELLQAGGIVQFEENRLIRMAEKAEFYQICEFMYEREHQYEKIISCY
LRDPLREEEVFNYIHNILSIPGYSVEEKQSVWQKAMDRMEELVSLNPSKAAELVATHFME
QIETVIQKLQNQFLLFQFLRSLLDPREGNQVNQELLQVSPFISEQFIELLCQYSPNQVRE
TLQVLECYRLEETIQITQKYQLLEVSAYLLEKKGDVHGAFLVMLERLQSKLLELTHENET
DPSLKDVEDVLGEAIALCQRNSHSLNQQQREALWFPLLEAMMAPQKLSDSGAPHPQTESL
KRLTMQVLHSMAAFIALPSILQRILQDPIYGKGKLGEIQGLILGMLDTFNYEQTLLETTT
SLLNRDLHWSLSNLRASITRGLNPKQDYCCICLQQYKRRQEMADEIIVFSCGHLYHSFCL
LNKECGINTEGQIKWICYKCNSRNRAGKLSENVPEMKKGRLTQAQAKMSPAYHSPRLDSA
AKKGGSEPILDPQQIQAFDQLCRLFRGPSRLALLTELSQTRRSESHGLLGAAQRGPAPYS
VFQNENFQLHLTPPPLTED
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atggtgggaacagagaacttgcccagtaagagtttagaattcatcactgggatctctgag
gaggaaaggagaaaacccttgcgcattctgttagaagggaagatggaaaacgagccagag
cgtgaaagggtggaatcaagtgcctgcccgttgggtcccgaagacgacctgaatcggtcg
ctcggtcaggaagccttgcttctgaagttcgcctacatagatctggacaaggagctggaa
ctcaaacccgagctgattgacgacaaggagtttgatatacctcaagttgatacccctcca
actctggaaagcatcctgaatgagactgatgatgaagacgagtcttttgttcttgaggac
ccttccctgctaaacatcgacaccgctgacacccactcgtatgacacatcgtcggtggcc
agctcagacagcggcgacaggaccaacctgaagaggaggaagaaactccccgattctttc
tcccttcatggatcggttatgcgtcattcgcttttgaaggggatttctgcccaaatagtc
tctgcagctgacaaagtagatgccggcttacctactgcaatagcggtgtccagtctgatt
gcagtgggcacttcccatggattggcgctcatctttggaaaagatcagaaccaagctctg
cggctgtgcctgggcagcactactatcgggtgtcagtacggtgccatctccgctctcagt
atcaacagcgactgttcaagacttctctgcggctttgcgaaaggacagatcaccatgtgg
gatctagccagcgggaaacttctgagatcaataacagatgctcaccccccaggaacagcc
attttacacatcaagtttacagacgacccaacgcttgcgatttgcaatgacagcggaggt
tccgtgttcgagctgacgtttaagagggtgatgggtgtgagaacgtgtgagtctcgatgt
ctgttcagcggctccaagggcgaagtttgctgcattgagcccctgcacgccaagatggaa
ctgagagatcaccccatcacccagtactcgctgctggccatggcgtctctgactaagata
ctagtgatcggattgaaaccatctttgaaagtgtggatgacttttccctatggacggatg
gagccttccagcgttcctctcttagcgtggcacttcgtcgccttacagaattccgtgaat
cccatgctggccttctgcaggggagacgtcgttcattttcttctggtcaagagagatgaa
tctggggccattcatgttactaagcaaaagcagcttcacctgcactatgacctcatcaac
tttacttggatcaactcgcgcacggtcgtgctcctggacagcgtggagaagttgcacgtg
atcgatcggcagactcaggaggaactggagacggtggaaatttcagacgttcagctggtc
tacaacagcagccacttcaaatccctggcgacggggggcaatgtcagtcaggcactggct
ctggttggggagaaggcctgctatcagtctatcagcagctacagtggccagatcttttat
ttgggcaccaagtccgttcatgtgatgatgttgaggagctggagagagagagtggaccac
atgctgaaacaagattgtctgacggaagccctggctctggcttggtcatttcacgaaggg
aaagccaaagcggttgtcggcttgacgggggacgccggcaagagaaaggccgtagtggcg
gatcggatggtagaaatcctgttccattgtgccgataaagctttgaagaagtgcccggac
cagggcaaaatccaagtgatggagcaacatttccaggatatggtgcctgtcatagttgat
tattgccttctccttcagcgcaaggacctcttatttagccagatgtatgacaaattaagt
gaaaattcagtggctaagggggtttttctggagtgcctcgagccatacgttttaaatgat
aaattagtggggatcacagcccaggtgatgaaagatttgctggttcactttcaagataag
aaattaatggagaatgtggaagcgctgatcgtgcacatggatatcaccagcctagacatt
cagaaggtagttctcatgtgctgggaaaatcacctgtacgatgccatgatctatgtctac
aacagaggcatgaatgaattcattagtcctatggagaaactcttcaaagttattgctcct
cccctcgctgcgggaaagtcattgacagatgaacaggttatcatgggcaacaagcttctt
gtatatataagctgctgcctggcaggtcgagcctatcccctcggcgacatcccagaagat
cttgtccccttggttaaaaaccaggtcttcgagtttctcatccgcctccactcagctgag
gcttcccctgaggaagaaatctacccttatgtccgcacactcctgcacttcgataccagg
gaattcctcaatgtgcttgctctgacttttgaagattttaaaaatgataaacaagctgtg
gagtatcagcaacgaattgtggatatcttgctgaaggtaatggtggagaactcagacttt
accccttcgcaagttggatgcctttttacttttctcgcccggcagcttgcaaagcccgac
aacaccctgtttgtgaacaggacccttttcgatcaggtcctcgaatttctctgtagccct
gatgatgactcacggcactctgaaagacagcaggtccttttagaactgttgcaggccgga
ggcatagtacagttcgaagagaatcggcttatccgaatggcggaaaaggcagaattctat
caaatttgtgaattcatgtacgaacgggaacaccagtatgaaaaaattatcagctgctac
ttacgtgatccactgagagaggaagaagtttttaattatattcacaacattctgtcgatc
cctgggtacagcgtcgaggagaaacagtctgtgtggcaaaaagctatggaccgtatggag
gaactggtgtcgctgaatccctctaaggctgcagagttggttgccacccacttcatggaa
caaatcgaaacagttatccaaaaactccagaaccagtttttgcttttccagtttctgagg
agtcttcttgacccaagggaaggtaatcaggtgaatcaggaactgctgcaggtttctcca
tttatcagtgaacagttcattgagctgctgtgtcaatacagccctaaccaggttagagag
accctgcaggtgctggaatgctacagactagaggaaaccattcagattactcagaagtat
cagctccttgaagtctctgcctacctcctggagaagaaaggagacgtgcatggtgctttc
ttagtaatgcttgagagactacagagcaaactgttggagctcacacatgaaaatgagacg
gacccgtccctaaaagatgttgaagatgtcttgggagaagcgattgccctttgccagaga
aattcacatagtttaaaccagcagcagcgagaggccttgtggtttccgctgttggaggcc
atgatggcccctcagaagctgtccgattccggagcaccacacccacagactgaatctctg
aagcgtctgacgatgcaggttctgcatagcatggcggcgtttattgccctgccatccatc
ttacaaaggatccttcaggatccaatatatggaaaaggaaaacttggagaaatccagggt
cttattctgggaatgctggacacctttaactatgaacagacactcctggaaaccaccact
agcctcctaaaccgtgatctccactggtcactcagtaatttgagagcatcaatcactaga
ggattaaatcccaaacaggattactgctgtatatgtctgcagcagtataagagacgacaa
gaaatggccgatgaaatcattgtctttagctgtggtcacctgtaccactccttctgtttg
ctgaacaaagagtgcggcataaacaccgagggccaaataaagtggatttgctacaaatgc
aattcacgtaacagagcagggaagctaagcgaaaatgtgccggagatgaaaaagggaaga
ctaacccaagcccaggccaaaatgtcaccagcttatcattcgccccgattggattcagct
gctaaaaagggaggttcagagccgattttggatccacaacaaatccaggcttttgaccag
ctctgtcgcctcttccgaggaccttctaggctggccctcctgacggagctgtcccagacc
cgcagaagcgagagccacggcctgctcggagctgcccagaggggcccggccccctacagc
gtcttccagaatgaaaacttccagctgcacctcacccctcctcctctcactgaggactga
DBGET
integrated database retrieval system
