Tachyglossus aculeatus (Australian echidna): 119925663
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Entry
119925663 CDS
T10703
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
119925663 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tacu00536
]
119925663 (COL13A1)
Glycosaminoglycan binding proteins [BR:
tacu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119925663 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
119925663
NCBI-ProteinID:
XP_038599960
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All DBs
Position
3:63044740..63259923
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AA seq
686 aa
AA seq
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METAILGRVNQLLDEKLKLHLPRQREIRDTSQRCSCPAGPPGPTGRPGLPGEKGGLGIPG
RMGLKGQSGEKGAPGDAGMSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGYPGPKGDMGV
TGSKGQPGLPGQKGEKGQCGDYPHRLLPLLNSVRLAPPPVIKRRTFQGEQGQAGIQGPPG
PPGPPGPSGPMGPLGNAGQPGPVGPPGRTGEPGKPGKDGNGLPGPPGPKGDPGIQGFHGR
KGERGMPGIPGKHGAKGAPGTAAAGMKGEPGTPGTKGDPGTAGMAGPPGLPGKRGQRGEK
GSSGLPGLPGYVGQKGEKGDAGNAIGLGQREPGPPGLPGPPGPKGEAGQIGQSGAPGFQG
QKGEPGASGEQGPPGPKGSKGDPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQPGPP
GSPGTPGQKGEIGLPGPPGHDGEKGPRGKSGEVGPPGPQGPPGKEGPPGIKGENGHLGNP
GEKGEAGQVGSPGLDGPTGEKGDQGIPGLPGLPGPIGLPGFTGEKGEVGEKGDAGAPISG
PPGPEGPPGPAGLQGVPGPKGEAGLDGVKGEKGTQGEKGDRGPLGLPGASGLDGRPGSPG
TPGPIGVPGPAGPKGERGSKGDPGTTGPTGAAGLPGLHGPPGDKGNRGHRGFKGEKGEPG
LPGLDGLDAPCPLGEDGLPVQGCWNK
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggagacggctattttgggaagagttaaccagctgctggatgagaaattaaagcttcac
ctgccaagacaacgggaaatccgggatacgtcccagagatgtagctgtccagcaggacct
cctggtcccacaggaagacctggacttccgggagagaaaggtggccttggcatcccagga
cgaatgggactaaaggggcagtccggagagaagggagccccaggagatgcggggatgtcc
attataggtccacgcggccctcctggccagcccggcacaagaggttttcccggatttccg
gggccaattggtttggatggcaagccgggttacccagggccaaagggagacatgggcgta
actggttccaaggggcaaccgggactaccaggacaaaaaggagaaaagggtcaatgtggg
gactacccgcacaggctgttgcctctcctcaattcagtgcgactggctccgcccccagtc
ataaaaagacgcacctttcagggtgaacaggggcaggcgggcatccagggaccaccagga
ccacccgggcctcccgggccctctggaccgatggggcctttggggaacgccggacagccg
gggccagtcgggccccccggcagaacaggagaaccagggaagccaggcaaagatgggaat
ggcttacctgggcctccaggaccaaagggagaccctgggattcagggcttccacgggcgg
aagggggagaggggcatgccagggatcccgggaaaacatggagccaagggagctcccgga
acagctgctgcagggatgaagggtgagccggggactccaggaacaaagggagatcccggc
acggcgggcatggcggggcccccaggtttgccagggaaaaggggccagaggggtgaaaaa
ggaagctctggcctccctggacttcctggatacgtggggcagaagggagagaaaggagat
gctggcaacgccattggattaggccaaagggaacccggccccccaggcttacccggccct
ccgggaccaaagggagaagctggccaaatcggccaatctggagccccaggattccaggga
caaaagggggaaccgggagcatcaggggaacaggggcctcctggcccaaagggctccaag
ggagatccaggcaaaggagaaatggtggattacaatggcaacatcaatgaagctctccag
gaaatccgcaccctggccctgatggggcctcctggtctcccagggcaaccaggaccacct
ggatccccagggacccctggacagaagggtgaaatcggtttgccgggacctccggggcat
gatggggaaaagggacctcggggcaaatcaggagaggtgggaccccctggaccccaaggg
cctccaggaaaggaaggacctccagggataaaaggagaaaatggccatctgggcaacccg
ggcgagaaaggggaggcaggacaggttggctcaccggggcttgatggtccaactggagag
aaaggagatcaagggataccaggacttcctggattgccaggcccaatcggcctcccggga
tttacaggggagaagggagaagttggagagaagggagatgcaggagcaccgatatctggg
cccccagggccagaaggccccccaggacctgcaggtctccaaggtgttcctggaccaaag
ggggaagctggacttgatggagtgaaaggggagaagggcacccagggagagaaaggagac
cgaggtccattgggattgcctggtgcttcaggtttggacggcaggcctgggtcaccgggc
actccaggaccaattggagttccaggtccagcaggaccaaaaggggagaggggcagtaaa
ggagatcctgggaccactggaccaacaggagcagcaggacttcctggtttacatggacca
ccgggtgacaaaggaaaccggggacatcgaggttttaaaggagagaaaggggagccgggg
ttaccagggctggacggattggatgccccgtgcccattgggagaagatggcttgccagtt
cagggatgctggaataagtga
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