Tachyglossus aculeatus (Australian echidna): 119925963
Help
Entry
119925963 CDS
T10703
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu05206
MicroRNAs in cancer
Brite
Chromosome and associated proteins [BR:
tacu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119925963 (DICER1)
microRNA pathway
RISC loading complex
119925963 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
119925963
NCBI-ProteinID:
XP_038600376
LinkDB
All DBs
Position
1:154441363..154526067
Genome browser
AA seq
1920 aa
AA seq
DB search
MKSPALQSLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDLNKNGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSSLEISASWTKEKWNQEFTQHQVLVMTCHVALNVLKNDYLSLSDINLLVFDECHLA
ILDHPYREIMKICENYPSCPRILGLTASILNGKCDPAELEEKIQKLEKILKSNAETATDL
VVLDRYSSQPCEIVVDCGPYVDKSGLYERLLKELDEALNFLNDCNITVLSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPFERQQFESVEWYNNRNQDNYVSWSDSEDDDE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRSKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYIMLADTDKIITFEEDLKTYKAIEKILRNKCSKSVDPGETE
TEPVVDDDDIFPPYVLRPDDGSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPD
STFYSTLYLPINSPLRASIVGPPMSCTRLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRNSYPKPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSL
QMLELITRLHQYIFSHILRLEKPALEFKPTEADSAYCVLPLNVVNDSSTLDIDFKFMDDI
EKSEARTGIPSTQYTKETPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTAIDAGV
GVQSLPADFRYPNLDFGWKKSIDSKSFISIPNSSLAENENDCKHSTILVPENAAHQGANK
TSSEENHDQMSVNYRIPLESPSKLQIEVSTDLSAINGISYNKSFANGNCDLVNKDFCQGN
QLNYYKQEIPIQPATSYPMQNLYSSENQPKPSNECTLPSNKYLDGNVNKSTSDGCPEMAV
TTSTLEVVDASKDMIVSEYSPSNGYSSKTLGPNPGLILQALTLSNASDGFNLERLEMLGD
SFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNW
LPPGYIVNQDKSNPDKWEKDDPTKDSMLANGKLDDDFDEEEDEDLMWRLPKEEADYEDDF
LEYDQEHIKFIDNMLMGSGAFVKKISLSPFSTTDSNYEWKMPKKASLGNVQFSSDFDDFD
YSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGIDTGKQSISYDLHTEQCIADKSIADC
VEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTEWESTLCPSTQSFNDPPRNLLANYA
PASATNVQSSFYKDMEYGCLKIPPRCMFDYPDAEKTLIHLISGFENFERKINYSFKNKAY
LLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNN
TIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDI
EVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEP
ETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPNS
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcaatccctcagcatggcaggactacagctcatgacccctgct
tcctccccaatgggtcctttttttggacttccatggcaacaagaagcaattcatgataac
atatacacgccaagaaaatatcaggttgaactgcttgaagcagctctggatcataataca
atagtctgtttaaacactggctcagggaagacatttattgcagtactactcactaaagag
ctgtcctatcagatcaggggagatctcaacaaaaatgggaaaaggactgtatttttggtc
aactctgcaaaccaagttgctcagcaggtatcagctgtcagaacccattcagatctcaag
gtgggagaatattcaagcctagaaataagtgcatcttggacaaaagaaaaatggaaccaa
gagtttacccaacatcaggttctggttatgacctgtcatgtcgctttgaatgttttaaaa
aatgattacctatccttatcagacataaaccttttggtgttcgatgaatgtcatcttgca
atcctagaccacccctatcgagaaattatgaagatctgtgaaaattatccatcgtgtcct
cgaattttgggactaactgcatccattttaaatgggaaatgtgatccagcggagttggag
gagaagattcagaaactggagaaaatccttaagagcaatgctgaaactgcaaccgatttg
gtggttttagacagatactcttctcagccatgtgagattgtagtggattgtggaccatat
gttgataaaagcggactctatgaaagactgctgaaggaattggatgaagcacttaatttt
ctcaatgactgcaacataactgtactttctaaagaacgagattctacgttaatttctaaa
cagatactgtcagactgtcgagcggttttggtggttctgggaccttggtgtgcagataaa
gtagctggtatgatggtaagagaactccagaagtatatcaaacacgaacaagaggagctg
cacagaaaatttttattgtttacagacactttcctaaggaaaatacatgcactctgtgaa
gagcacttctcacctgcctcacttgacctgaaatttgtaaccccaaaagtgatcaaactg
cttgaaatattgcgcaagtataaaccatttgagcggcagcagtttgaaagtgttgagtgg
tataacaataggaaccaagataattatgtttcttggagcgattccgaagatgatgacgag
gatgaggaaattgaagaaaaagagaagccagagacaaattttccctctccatttaccaac
attttatgtggaattatttttgtggagagaagatacacggcagtggttttaaacagattg
ataaaggaagctggcaaacaagatccagaactggcttatatcagcagcaattttataact
ggccatggcattggaaagaatcaacctcgtagcaaacagatggaagtggaatttagaaaa
caggaagaggtgcttaggaaatttcgagcacatgagaccaacttactcattgcaactagt
atagtggaagagggtgttgacataccaaaatgcaacttggtggtccgttttgatttgccc
acagagtaccgctcttacgtgcagtccaagggaagagctagggcaccgatctctaattac
atcatgttagcagacacagacaaaatcataacctttgaagaagatctcaaaacctacaaa
gctattgaaaagatcttaagaaacaagtgctccaagtcagtcgatcctggggaaaccgaa
acggaaccagtggtggatgatgatgacattttcccaccctacgtgctccgaccagatgat
ggcagtccaagagtcaccattaacacggctataggacacatcaatagatactgcgctaga
ttaccaagtgatccatttactcatctagctccaaaatgtaaaacgagagaacttcctgat
agtacattttactcaaccctttatctgccaatcaactctccgctccgagcctcgatcgtg
ggtcctccaatgagctgtacaagactggcagagagagttgtagctcttatttgctgtgaa
aaactgcacaaaattggtgaactggatgatcatttaatgccagttggaaaagagactgtt
aagtacgaggaggagcttgatttacacgacgaagaagaaaccagtgttccaggaagaccc
ggctccaccaaacgaaggcagtgctacccgaaagcaattccagagtgtttgcggaatagt
tatcccaaacctgatcaaccctgttatctatatgtaataggaatggtgttaactacacct
ttacctgacgaactcaactttagaaggcggaaactgtatcctcctgaggataccacaaga
tgttttggaatactgacagccaaacctatacctcagattcctcattttcctgtgtatact
cggtcgggagaggttaccatatctattgagctgaagaaatctggtttcactttgtcgttg
caaatgctcgagctgatcacaagactccaccaatacattttctcccatattcttcggctt
gaaaaacctgcactagaattcaaacccacagaagctgattcagcctactgtgttctacct
cttaatgtcgttaatgactccagcactttggacattgactttaaattcatggacgatatc
gaaaaatcagaagctcgtacaggcattcccagtacacagtatacaaaagaaacacctttt
attttcaaactagaggattatcaggatgcagttatcattccaaggtatcgcaatttcgat
cagcctcatcgattttatgtagctgatgtatacactgatcttactccactcagtaaattc
ccttcccctgaatatgaaacttttgctgaatattacaaaacaaagtataatcttgacctg
accaatctcaaccagccactgctggatgtggaccacacatcttcaagacttaatcttttg
actcctcgccatttaaaccagaagggcaaagctcttccattaagcagtgctgagaaaagg
aaagccaaatgggaaagtctgcagaataagcagatcctggttccagagctctgtgctatc
catccaattccagcgtcactgtggagaaaagcggtctgcctccccagtatactttatcgc
ctgcactgcctgttgacagccgaggagctgagagcccagacagccatcgatgctggggta
ggggttcaatcgcttcctgccgatttcagatatcccaacttggactttgggtggaaaaaa
tctattgacagcaaatccttcatctcaattcctaactcctctttagctgaaaatgaaaat
gactgtaagcacagcacaattttagtccctgaaaatgctgcacatcaaggtgctaataaa
acctcctctgaagaaaatcatgaccagatgtctgtgaactacagaataccgctcgagtca
cccagtaaactccaaattgaagtctcgacagacctttcagcaattaatggtatttcttac
aataaaagttttgccaatggcaattgtgatttagttaacaaagacttttgccaaggaaat
caactcaattactataagcaggaaatacctatacaaccagctacctcatatccgatgcag
aatttatacagtagtgagaaccagcccaagcccagcaatgaatgtactctaccgagtaat
aaataccttgatggaaatgttaacaaatctacctcagatggatgccccgagatggcagtg
accaccagtactttagaagttgtcgatgcgtcgaaagatatgattgtttctgaatatagc
ccttccaatggatattcctcaaaaaccctcggtcccaatcccggtctcattctccaggct
ctgaccctttcgaatgctagtgatggatttaacctggagcgacttgaaatgctcggtgac
tcctttttaaagcacgccatcactacatacctgttttgcacttaccctgatgctcacgag
ggacgcctgtcatatatgcgaagcaaaaaagtcagcaactgtaatctgtatcgacttggg
aagaagaaggggctgcctagtcgcatggtggtgtccatttttgatccccctgtcaactgg
cttcctcctggttacattgtaaatcaagacaagagcaaccctgataaatgggaaaaagac
gatccgacaaaagacagcatgttggctaatggaaaactggacgatgattttgatgaggaa
gaggatgaagacttgatgtggaggctcccaaaggaagaagctgattacgaagatgacttt
ttggagtacgatcaggaacacatcaagtttatagataatatgttgatgggatcgggggct
tttgtgaagaaaatttctctttctcccttttcaaccactgattctaattacgaatggaaa
atgcccaaaaaggcatccctgggtaatgtacagttttcatccgattttgatgattttgac
tacagctcttgggatgcaatgtgctatttggatcctagcaaagctgtcgaggaggacgat
tttgtggttggcttctggaatccctccgaagaaaactgtggcatcgacacagggaaacag
tcgatctcttacgacctgcatacggagcagtgcatcgccgacaagagcatcgcagactgt
gtggaggctctgctgggctgctacttgaccagctgcggtgagagagctgcccagcttttt
ctctgttctttgggcctgaaggttctcccggtaattaagaagactgagtgggagagcact
ctgtgccccagcacgcagagtttcaacgatccaccgaggaatctgctggcaaactatgcc
cctgcctccgcaaccaacgtgcagtcttctttctataaagacatggagtatggttgcctg
aagattcccccgaggtgcatgtttgattatccggatgcagagaaaacactgattcacctt
atatcgggctttgaaaacttcgaaagaaaaatcaactacagtttcaagaacaaggcgtat
cttctccaggcatttactcatgcctcttaccactacaataccattactgattgttaccag
cgcttggaattcctgggagatgcaattttggactacctcataaccaagcacctttatgaa
gacccacggcagcactccccaggagttctaactgacttgcgatccgctctggtcaacaac
accatctttgcgtctttagctgtgaagtatgactaccacaagtacttcaaagctgtctcc
ccagagctgttccacgtcattgatgacttcgtgcagtttcagcttgaaaagaatgaaatg
caaggaatggattctgagcttagaagatccgaagaggatgaggaaaaagaagaagatata
gaagtcccaaaggccatgggggatatattcgagtcacttgctggtgccatctacatggac
agcggaatgtcactagaaatggtttggcaagtctactatccgatgatgcggccactgata
gaaaaattttctgcaaatgtcccccgttccccagttcgggagttgctagaaatggaacca
gaaaccgccaaatttagtcccgcagagagaacctacgacgggaaggtcagagtaaccgtg
gaagtggtaggaaaggggaagtttaaaggtgtcggccgaagctacaggattgcgaagtcc
gcagctgcgagacgagcactacgaagcctcaaagcaaaccaacctcaggttccaaacagc
tga
DBGET
integrated database retrieval system
