Tachyglossus aculeatus (Australian echidna): 119926761
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Entry
119926761 CDS
T10703
Symbol
COL11A1
Name
(RefSeq) collagen alpha-1(XI) chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu04820
Cytoskeleton in muscle cells
tacu04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119926761 (COL11A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
119926761 (COL11A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tacu00536
]
119926761 (COL11A1)
Glycosaminoglycan binding proteins [BR:
tacu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119926761 (COL11A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
119926761
NCBI-ProteinID:
XP_038601047
LinkDB
All DBs
Position
4:complement(57181104..57468219)
Genome browser
AA seq
1807 aa
AA seq
DB search
MEAARPSWRTKRGPRPAYLAALVASICILRAARVTGAGPVDVLKALDFNKSPEGISRTAG
FCTNRRNSKGSDTAYRVSKHAQLSAPTKQLYPGGAFPEDFSILFTVKPKKGIQSFLLSIY
NEQGIQQIGVEVGRSPVFLFEDQHGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMI
VDCKKKTTKPLDRSQRAIVDTNGITVFGTRILDEEVFEGDIQQLLITADPKAAYDYCEHY
SPDCDSPVPNAAQAQEPQIDEYAPEDIIEYEYEYGEADYKEAESVTEGPTLIEETVAQTE
ANVVDDFQEYNYGTAESYQTETPRRVSGPNEPNPVEEVFTEEYVTGEDYNSPKNNPEESQ
YGNRGVDGRDSDLPIDGDLGEYDFYDYKEYEEKPTNPTMEEFGPGVPAETDITETSVHGH
GAYGEKGQKGEAAVVEPGMLIEGPPGPQGPSGLTGPPGLQGPTGPPGDPGERGPAGRPGL
PGADGLAGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIAMRGPPGPMGLTGR
PGPVGGPGSSGAKGEGGDPGPQGPRGIQGPPGPTGKAGKRGRPGADGGRGMPGEPGSKGD
RGFDGLPGLPGDKGHRGERGPQGPPGSPGEDGMRGEDGEIGPRGLPGEAGPRGLLGPRGT
PGPTGQPGIAGIDGPQGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGSIGPPGEKGPQGK
PGLAGLAGADGPPGHPGKEGQSGEKGALGPPGPQGPVGYPGPRGVKGADGVRGLKGSKGE
KGEDGFPGFKGDMGLKGDRGEVGQMGPRGEDGPEGPKGRAGPNGDPGGVGQAGEKGKLGV
PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGK
PGPKGTSGSDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGK
TGPPGPGGVVGPQGSTGETGPIGERGHPGPPGPPGEQGLPGSAGKEGAKGDPGPQGISGK
DGPAGLRGFPGERGLPGAQGAAGLKGGEGPQGPPGPLGSPGERGSAGTAGPIGLPGRPGP
QGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPGGSPGEDGDKGEIGEPGQKGS
KGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGL
QGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGE
AGNPGPPGESGTGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPGDPGP
PGEPGPGGQDGVGGEKGEDGDTGQPGPPGPSGEAGPPGPPGKRGPPGAAGPEGRQGEKGA
KGEAGSEGAPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPLGPPGL
PGLKGDPGFKGEKGHPGLIGLIGPPGEQGEKGDRGLPGMQGTAGAKGDGGITGPAGPIGP
PGPPGLPGPQGPKGSKGSSGPGGQKGDSGLPGPPGPPGPPGEVIQPLPILSPKKTRRHTE
GMMADAGDNILDYSDGMEEIFGSLNSLKQDIDRMKFPMGTQNNPARTCKDLQLCHPDFPD
GEYWIDPNQGCPGDSFKVYCNFTAGGETCIYPDKKSEGVRLSSWPKENPGTWFSEFKRGK
LLSYLDVEGNSINMVQMTFLKLLSSAARQNFTYNCHQSVAWHDVSSDSYDKALRFLGSND
EELSYDNNPYIKALYDGCASRKGYEKTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEV
GPVCFLG
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcccggcccagctggagaacgaagaggggcccccgccccgcctacctcgcc
gccctcgtcgcctccatctgcatcctccgagcggcccgggtcacgggagctggaccagtc
gacgttctcaaagcattagactttaacaaatcacctgaaggaatatcaagaacagcagga
ttttgcacaaataggaggaattcgaaaggatcagatactgcttatagagtttcaaaacat
gcacaactcagtgccccaacaaaacagttatatccaggtggtgctttccctgaagatttt
tcaatattatttacagtaaaacctaaaaagggaatccagtccttccttttatctatctac
aatgagcagggaattcagcaaataggtgttgaggttggaagatcccctgtgttcttgttt
gaagaccagcatgggaaacctgccccagaagattatcctctttttagaactgtcaacatt
gctgatgggaagtggcatcgtgtagctatcagtgtggagaagaaaaccgtgaccatgatt
gtcgactgcaagaagaagaccacaaaaccactggacagaagtcaaagagcaattgtggat
accaacggcatcacggtgtttggaacaagaattctggatgaggaagtttttgagggtgat
atccagcaactgctaattacagctgaccccaaagcagcttacgactattgtgagcattat
agtcctgactgtgattcccctgtccccaatgctgctcaggctcaagaacctcaaatcgac
gagtatgcacctgaagatataatcgaatatgaatatgagtatggggaagcagattataaa
gaggctgaatctgtaacagagggacccaccctaattgaggaaacagtagcacaaactgag
gccaatgttgttgatgacttccaggagtacaactatggaactgcagagagttaccaaacc
gaaactccccgtcgtgtatcgggaccaaatgagccaaatccggttgaagaagtatttaca
gaagagtacgtaactggagaggattataattccccgaaaaataatcctgaggaatcccaa
tatggaaacagaggagtagacggcagggactctgatctcccgatagatggggatttgggc
gaatatgatttttatgactataaagaatatgaagaaaaaccaacaaatcccactatggag
gagtttggtcctggtgttccagctgagactgatatcacagagacaagtgtgcatggacat
ggcgcatatggagaaaaaggacaaaaaggagaagcagctgtagttgaacctgggatgctt
attgaaggaccaccaggaccacaaggaccttctggtctcacaggcccacctggactccaa
ggtccaacaggccctcccggtgaccctggtgagcggggcccagcggggcgtcctggtcta
ccaggggctgatggtctagctggtcctcctggaacaatgttgatgttaccatttcgctat
ggtggcgatggttctaaaggaccgactatatcagctcaggaagctcaagcacaggctatt
cttcagcaagcccggattgctatgagaggtccacctggcccaatgggtctaaccggaaga
cctggacctgtgggtggacctggttcttcgggagccaaaggagaaggaggtgatccggga
cctcagggtcctcgtggaattcaaggtccccctggtccaactggcaaagcaggaaagcgg
ggtcgccctggtgctgatggaggtcgagggatgcccggagaacctggatcaaagggtgac
agaggctttgatggactccctggtctacctggagacaaaggccacagaggagaacgtggt
cctcaaggccctcctggctctcctggtgaagatggaatgaggggagaagatggagaaatt
ggaccaagaggtcttccaggtgaagctggtccacgtggactactgggaccaagaggaacc
cctggccctacaggccaacccggtattgcaggtatagatggcccacaaggtcctaaagga
aacatgggtcctcaaggggaacctggaccgcctggtcaacaaggaaatccgggccctcaa
ggtcttcctgggccccaaggatctattggaccccctggtgaaaaaggaccgcaaggaaag
cctggtcttgctggactagctggtgctgatgggccgcctggtcatcctggtaaagaaggc
caatctggagagaaaggagctctgggaccgcctggtccacagggacccgttggctaccct
ggccctcggggggtgaagggagcagatggtgtcagaggtctgaaaggctccaagggtgaa
aagggagaagacggtttcccaggatttaaaggagacatgggtcttaagggagatcgggga
gaagtaggccagatggggcctagaggagaagatggccctgaaggtcccaaaggtcgagcg
ggcccaaatggagaccctggtggtgttggtcaagcaggagagaagggaaaacttggtgtt
ccagggttacctgggtatccaggaagacaaggtccgaagggttccactggattccctgga
ttccctggtgccaatggagagaaaggagcaaggggagtagctggaaaaccgggccccaga
ggacaacgtggtcccacgggccctcgaggttctagaggtgcaagaggcccgacagggaaa
ccaggtccaaagggtacatcaggcagtgatggcccccctggcccacctggtgaaagagga
ccccaaggacctcagggtcctgttggatttcctggaccaaagggcccacctggaccacct
ggaaaggatggacttcctggacacccagggcagcggggagagactggttttcaaggcaag
acaggccctccaggaccaggaggagtcgtcggaccacagggctcaactggtgagactggg
ccaattggtgaacggggacatcctggccctcccggccctcctggggaacaaggtctccct
ggatcagctggcaaagaaggtgccaagggtgaccctggccctcagggcatttctggaaaa
gatggaccagcgggacttcgtggcttccctggagagaggggccttcctggagcccagggg
gcagctggtctgaaaggaggggaaggtccccagggtccacctggtccacttggttcacct
ggggaacggggatcagcaggaacagctggtccaattggtttacctggtcgccctgggccc
caaggccccccagggccagctggagagaaaggtgctcctggagaaaaaggaccccaaggt
ccagctggacgggatggagtccagggaccagtggggctgcctggtcctgctggtccaggg
ggctccccaggagaagatggggacaagggtgaaattggtgaaccaggacagaaaggcagt
aaaggtgacaaaggagaaaatgggcctcctggacctccaggtcttcaagggcctgttggt
gccccagggatagcaggaggtgatggcgaacctggtccaagaggtcagcagggtatgttt
ggccagaaaggtgatgaaggcgcaagaggatttcctggtcctccaggccccattggcctc
cagggtctgcctgggcctcctggtgaaaaaggtgaaaacggtgatgttggtccaatgggt
cccccaggacctcctggtccacgaggtcctcaaggtcccaacggagctgatggtccacaa
ggccccccaggatcagttggttcagttggtggtgtcggtgaaaagggtgaacctggggaa
gctggtaatccagggcctcccggagagtctggcacaggcggcccaaagggtgaaagggga
gaaaaaggtgaggctggtcctcctggagctgctgggcctcctggtgccaagggtccccca
ggagatgatggacccaagggtaatccgggtcctgttggcttccctggagaccctggtcct
cctggtgaacctggccctgggggtcaagatggtgttggtggcgagaagggtgaagatgga
gatactggccaacctgggcctcctggtccttcgggtgaagctgggccacctggtccccca
ggaaaacgaggccctccaggagctgctggtccagaggggagacagggtgaaaaaggtgct
aagggcgaagcaggctcagaaggcgctcctgggaaaactggtcccgttggtcctcaggga
cctgcaggaaagccaggtccagaaggcttacgtggtatccccggccctgtgggcgaacaa
ggcttaccgggagctgcaggccaagatgggcccccaggccccttggggcctcctggctta
cctggcctaaaaggtgatcctggtttcaagggtgaaaaggggcatcctggtttgattggt
ctcattggtcctcccggagagcaaggtgaaaaaggtgaccgcggtctcccagggatgcaa
ggaactgctggagccaagggtgatggtggaattactggccctgctggccccattggtccc
cctggtccaccaggcctaccgggtccgcaaggtccaaagggatccaaaggttcttcggga
cctggtggtcagaagggagacagtggacttcctggacccccaggccctcctgggcctcct
ggtgaagttatccagcctttgccgatcctatcgcctaaaaaaacacgacggcacactgaa
ggcatgatggccgatgcaggagataatattcttgactactctgacggaatggaggaaatt
tttggttccctgaactccttgaaacaagatattgatcgcatgaagttcccgatgggcact
cagaacaatccagcccgaacctgcaaagatctgcagctctgccacccagacttcccagat
ggtgagtactggattgaccctaaccaaggctgtcctggcgattccttcaaagtttactgc
aacttcacagctggtggggagacttgcatttatccagacaagaaatctgagggcgtcaga
ctttcctcatggccaaaggagaacccaggaacctggtttagtgaatttaagagaggcaaa
ctgctctcatatttggatgttgaaggcaattctattaatatggttcagatgacattccta
aaactactgagctctgctgctaggcaaaatttcacctacaattgccatcagtcagtcgca
tggcatgatgtgtcgtctgacagctatgacaaagcgctcaggttccttgggtcaaatgat
gaagagctgtcttatgacaacaatccttacatcaaagcactctacgacggctgtgcatca
agaaaaggctatgaaaagactgtgattgaaatcaatacacccaaaatagaccaagttcct
attgttgacgtgatgatcaatgactttggtgatcagaaccagaagtttgggttcgaagtt
ggtcccgtgtgcttcctcggttaa
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integrated database retrieval system
