Tachyglossus aculeatus (Australian echidna): 119927043
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Entry
119927043 CDS
T10703
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu04140
Autophagy - animal
tacu04148
Efferocytosis
tacu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119927043 (VPS16)
04148 Efferocytosis
119927043 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119927043 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tacu04131
]
119927043 (VPS16)
Membrane trafficking [BR:
tacu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119927043 (VPS16)
Hops complex
119927043 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
119927043
NCBI-ProteinID:
XP_038601509
LinkDB
All DBs
Position
4:complement(128444134..128458849)
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AA seq
836 aa
AA seq
DB search
MDCYTANWNPLGEAAFYRKSELYSMDWNLTEELRDCLMAAAPYGGPIALLRNPWRKEKSP
SGRPVLETYSASGVALASMVWKSGQVAQLGWTASEELLCVQEDGSVLVYDLFCDFKRHLS
LGNEVLQNRVLEARVFHTEFGSGIAVLTGAHRFTLTANVDHLTLRRMPDVPGLQQSPTCW
TVLSQDRLTLVLLATGTDLFLLDNTVCSPVTPAGLAPGAGSVLQMAVSFNYRYLALFTDS
GLIWMGTASLKEKLCEFNCSIRTPPKQMSWCCRPRSQQRAVVLAWERRLMVAGDAPESIQ
FVLDEDSYLVPELDGVRILARTHHEFLQEVPAASEEIFKIASMAPGALLLEAQREYEKES
QKADEYLREIREQDLLADAVEQCIQAAACEQEPAIQKSLLRAASFGKCFIDKFPPEGFVR
TCRDLRVLNAVRDYQIGIPLSYAQYKQLTIEVLLDRLVLRRLYPLAIRICEYLRLPECQG
ASRVLAHWACYKVQQKDKSDEEVARAINQKLGDTPGISYSEIAARACHCGRSELAIKLLE
YEPRSGEQVPLLLSMKRSKLALSKALESGDSDLVFTVVLHLKNELNRGDFFMTLRSQPAA
LSLYRQFCKHQELETLRDLYNQDDNHQELGDFHVRDSYSGSDKRIEGRVAALQAAADEFS
KARNEFAAKATEEQMKLLRLQRRLEEEVGERFLDLSLHDTVSALILAGSHKRAEQLARDF
RIPDKRFWWLKLTALAQREDWEELEKFSKSKKSPIGYLPFVEICMKHHNKFEAKKFALRV
SPEQKVKASILIGDLEQAAEVALEHRNEAELSLVLSRCDPALAERIQRARAQAQKK
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggactgttacacggccaactggaacccgctcggcgaggcggctttctaccggaagtcc
gagctgtacagcatggactggaacctgacggaggagctgcgggactgtctgatggccgcc
gcgccctatggaggtcccatagcgctgctaaggaacccgtggaggaaagagaagtccccc
agcgggaggcctgtgttggagacgtattcagcatccggagtagcactggccagtatggtg
tggaagagtggtcaggtggcccagctgggctggacagccagcgaggagctgctgtgcgtg
caggaggacggctccgtgctcgtctacgacctcttctgtgacttcaaacggcatctcagc
ctaggcaatgaggtcctgcagaaccgggtgttggaggcccgtgtgttccacaccgagttc
gggtccgggatcgccgtcctcacgggagcccaccgcttcacgctgactgccaacgtggac
cacctcacactccgcaggatgcctgacgtcccagggcttcagcagtcaccgacctgctgg
accgtgttgtctcaggaccgactgaccctagttctgctggccacggggacggacctcttc
ctcctggacaacacagtctgctctccggtgactccagccggtctggccccgggggccggc
agcgtcctgcagatggccgtctccttcaattaccgctacctggcactgttcacggactcc
ggcctcatttggatgggcacagcctcgctcaaggaaaaactgtgtgaattcaactgcagc
atccgaacccctccaaagcagatgtcctggtgctgccgtccacgcagtcaacagcgcgcg
gtggtcctggcctgggagcggcgcctcatggtggccggggacgcgcctgagtccattcaa
ttcgtcctggacgaggactcctacctggtgcctgagctggacggggtccgtattctggcc
cggacccatcacgagttcctgcaggaggtccctgcggccagtgaggaaatcttcaagatt
gcctctatggcccccggtgccctcctcctagaagcccagagggagtacgagaaggagagc
cagaaggcagacgagtacctgcgagagattcgggagcaggacctgctggccgacgccgtg
gagcagtgcatccaggcggcagcctgtgagcaagagcccgctatccaaaagagcctgctc
agggcggcctccttcgggaagtgcttcatcgacaagttccctcccgagggctttgtgcgg
acctgccgggacctacgggtgctcaacgctgtgagggactaccagatcggcatccccctc
agctacgcccagtacaaacagctcaccattgaggtcctgctggacaggctggtgctacga
cgtctgtacccgctggccatccgcatttgcgagtacctgcgtcttcccgagtgtcagggt
gccagccgggtgctagctcactgggcctgctacaaggtgcagcagaaggacaagtccgac
gaggaggtggctcgggccatcaatcagaagttgggggacaccccaggcatctcctattcg
gagatcgccgcccgcgcgtgccactgcggccgctcggagctggccatcaagctcctggag
tacgagccgcgctccggggagcaggtcccgttgctgctcagcatgaagagaagcaaactg
gccctgagcaaagcgctagagagcggggacagcgatctggtgttcactgtggtgctgcac
ctcaagaacgagctgaaccgtggggacttcttcatgacactgcgcagccagccggccgcc
ctcagcctctatcgccagttctgcaagcaccaggagctggaaaccctgcgtgacctgtac
aaccaggacgacaaccaccaggagctcggggacttccatgtccgtgacagctactctggc
agtgacaagcggattgaggggcgcgtggcagctctgcaggcggcagcagatgagttctcc
aaggccaggaatgagtttgcagccaaggctacagaggaacagatgaagctgctgcgcctg
caacgccgcctggaggaggaggtgggggaacgcttcctggacctgtcgcttcacgacacc
gtgtcggccctcatcctggccgggagccacaagcgcgcagagcaacttgcccgtgacttc
cgcatcccagacaagaggttctggtggctgaagctcacagccctggcccaacgagaagat
tgggaagagttggaaaagttctccaaaagcaagaaatcccccatcggctatctgcccttt
gtggaaatctgcatgaagcaccacaacaagtttgaggccaagaagttcgctttgcgtgtg
agtccggagcagaaggtcaaggcgtccatcctcattggggacctggaacaagctgcagag
gtggccctggaacaccgcaacgaggccgagctcagcctggtcctctcccgctgcgaccct
gccttagctgagcggattcagcgggcgcgggcccaggcccagaagaaatga
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