Tachyglossus aculeatus (Australian echidna): 119927248
Help
Entry
119927248 CDS
T10703
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu04064
NF-kappa B signaling pathway
tacu04514
Cell adhesion molecules
tacu04668
TNF signaling pathway
tacu04670
Leukocyte transendothelial migration
tacu04933
AGE-RAGE signaling pathway in diabetic complications
tacu05143
African trypanosomiasis
tacu05144
Malaria
tacu05417
Lipid and atherosclerosis
tacu05418
Fluid shear stress and atherosclerosis
Brite
Cell adhesion molecules [BR:
tacu04515
]
Immunoglobulin superfamily
VCAM
119927248 (VCAM1)
CD molecules [BR:
tacu04090
]
Proteins
119927248 (VCAM1)
Lectins [BR:
tacu04091
]
I-type lectins (Siglecs)
119927248 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set
V-set
ICAM1_3_5_D2
C2-set_2
C1-set
Ig_6
Ig_4
Ig_5
Receptor_2B4
ICAM_N
TrkA_C
TMEM132_3rd
Motif
Other DBs
NCBI-GeneID:
119927248
NCBI-ProteinID:
XP_038601725
LinkDB
All DBs
Position
4:55498108..55522491
Genome browser
AA seq
828 aa
AA seq
DB search
MAGKRVGLALATEAILLVLVTSESFKVEITPGPRIAAQIGNVTVLTCIATGCAAPSFSWR
TQIDSPLGGEVEPGAKKSILTMNPVDFKNEHSYLCTAFCENKKMERAVQVELYSFPQDPV
ITMSDFLEVGKPATITCQVPQVYPSERLKIELLKDGHIIESKEFFMDEEKKSLETKSLEV
TITPTILDIGQSITCLAELPIDDMEFLPKLRKTTQKLPINTAPKNTVVSITPSNVVQAGD
YVKMTCSSEGLPAPEISWSKKRRDGNLEILSHNATLILNAAMTTDSGLYVCEGTNRVGKD
KKEVELIVQDESFKAEILERPKITAQIGNLTVLTCSVTGCPNPSFSWRTQTDSPLEGKVK
NEDTRSTLTMSPVGFKNEHSYLCTAFCGTRKMESDIQVELYSFPHDPVITMSDFLEVGKP
ATITCQVPQVYPSERLKIELLKDGYSIESKEFFMDEEKKSLETKSLEVTITPTTLDIGQS
ISCQAELPIDDMEFLPKLRLTTRRLNIGIAPRNTVISGAPTTTVQEGDYVTVSCSSEGLP
APEISWSKRLDNGDLEFLSQNATLTFNATVTENSGIYVCEGSNQAGKERKEVELIVQVPP
KDTVLVAFPSNSVKEGDTVTISCTSVGVSPSQIVLRKKADPGEQVLESRNGHYTIHAARL
EDAGIYECESKTEVGRQLRSLNLDVKVPPRNTTILIHPSRNVNEGENVTITCKTFSHPPA
VIVLKKVDLANEVSICSKNGTFTLYHVTPNDTGVYVISVSNEVGKDSEQIEISVKRRENH
IDYFSPELVALYCVASLIIPSVGMIIFLVRKANVKGSYSLVDALKSKV
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggctgggaaaagggtcggactcgccctagccacagaagcgattttgctggtgttggtg
acttctgaaagttttaaggtggaaatcactccaggacccagaatcgccgctcagattggc
aatgtaaccgtgttgacctgcatcgctactgggtgtgcggctccatcgttctcttggaga
acccagatagacagtcctcttgggggggaagtagaaccaggagcaaagaagtccatcttg
accatgaaccccgtggacttcaagaatgaacactcttacttgtgtaccgccttttgtgag
aataagaaaatggagagggccgtccaggtggagctttactcttttccccaagatccagtg
attacaatgagtgactttctggaggtggggaagcctgccaccatcacctgccaagtcccc
caggtttatccatcagagcgcttgaagattgaactcctgaaagatgggcacatcattgag
agcaaagagtttttcatggatgaggagaagaaatctctggagaccaagagcttggaggtg
accattacccccaccattcttgacattgggcaatccatcacttgtctggctgaattgcca
attgatgacatggagtttcttcccaagctgaggaaaaccacacagaagctccccattaat
actgcaccaaagaatacagtcgtctccatcaccccctccaatgttgtgcaggcaggtgac
tatgtgaagatgacatgttccagtgaaggccttcccgctccagagatttcttggagtaag
aaaaggagggatgggaatctggaaattctttcccacaatgcaactctcattctaaatgcc
gcgatgacaacagattctggactgtatgtgtgtgaaggaactaatcgggttggcaaagat
aaaaaagaagtggaactgattgttcaagatgaaagcttcaaagctgagatcttagaaaga
cccaaaatcactgcccagattggcaacttgaccgtgttgacctgtagtgttaccggatgc
ccgaacccatctttttcttggagaacccagactgacagtcctctcgaagggaaagtaaag
aacgaagacaccaggtctaccttgaccatgagccctgttggcttcaagaatgaacactct
tacctgtgtactgccttttgtggaactaggaaaatggagagtgacattcaagtggaactt
tactctttcccccatgatccagtgattacaatgagtgattttctggaggtggggaagcct
gccaccatcacctgccaagtcccccaggtgtatccatcggagcgcttgaagatcgaactc
ctgaaagatgggtacagcattgagagcaaagagtttttcatggacgaggagaagaaatct
ctggagaccaagagcttggaggtgaccattacccccaccactcttgacattgggcaatcc
atcagttgtcaggctgaactgccgattgatgacatggagtttcttcccaagctaaggcta
accacacggaggttgaatattggcatcgcaccaaggaatacagtcatctctggcgctccc
accactactgtgcaggaaggtgattatgtgacagtgtcatgttccagtgaaggtcttccg
gctccagagatttcttggagtaaaagactggataatggggatctggaatttctttcccag
aatgcaactctcactttcaatgccacagtgacagaaaattctggaatttatgtgtgtgaa
ggaagtaaccaggctggcaaagaaagaaaagaggtggagttaattgttcaagttccacca
aaagacacagtgcttgtagctttcccttccaacagtgttaaagaaggagacactgtaact
atctcttgcacatccgtgggtgtttctcccagtcaaattgtcttaaggaagaaagctgat
ccgggagagcaagtactggaatccagaaatggtcattatactatacatgctgctcggtta
gaggatgcaggaatttatgaatgtgaatccaaaactgaggttggacggcaattgagaagc
ctaaatcttgatgttaaagtaccacctcgaaacacaacaatattgattcacccatctaga
aatgtaaatgaaggggaaaatgtcaccattacatgtaaaacatttagccatccgcctgca
gtgattgtcctgaaaaaggttgatctggccaacgaagtatccatatgttcaaagaatgga
acctttactttgtatcatgtcaccccaaatgacaccggggtatatgtgattagtgtttcc
aatgaggttggaaaagactcggaacagattgaaatctcagttaagagaagggaaaaccac
atagactacttttctcctgaacttgttgcactctactgcgtcgcctccctcatcatccca
agcgtcggaatgatcattttcctcgtgaggaaagccaacgtcaagggttcctacagcctg
gtagatgcactcaaatccaaagtgtag
DBGET
integrated database retrieval system
