Tachyglossus aculeatus (Australian echidna): 119927248
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Entry
119927248 CDS
T10703
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu04064
NF-kappa B signaling pathway
tacu04514
Cell adhesion molecules
tacu04668
TNF signaling pathway
tacu04670
Leukocyte transendothelial migration
tacu04933
AGE-RAGE signaling pathway in diabetic complications
tacu05143
African trypanosomiasis
tacu05144
Malaria
tacu05417
Lipid and atherosclerosis
tacu05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
119927248 (VCAM1)
04668 TNF signaling pathway
119927248 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119927248 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
119927248 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
119927248 (VCAM1)
05143 African trypanosomiasis
119927248 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
119927248 (VCAM1)
05418 Fluid shear stress and atherosclerosis
119927248 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
119927248 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tacu04515
]
119927248 (VCAM1)
04090 CD molecules [BR:
tacu04090
]
119927248 (VCAM1)
04091 Lectins [BR:
tacu04091
]
119927248 (VCAM1)
Cell adhesion molecules [BR:
tacu04515
]
Immunoglobulin superfamily
VCAM
119927248 (VCAM1)
CD molecules [BR:
tacu04090
]
Proteins
119927248 (VCAM1)
Lectins [BR:
tacu04091
]
I-type lectins (Siglecs)
119927248 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set
V-set
ICAM1_3_5_D2
C2-set_2
C1-set
Ig_6
Ig_4
Ig_5
Receptor_2B4
ICAM_N
TrkA_C
TMEM132_3rd
Motif
Other DBs
NCBI-GeneID:
119927248
NCBI-ProteinID:
XP_038601725
LinkDB
All DBs
Position
4:55498108..55522491
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AA seq
828 aa
AA seq
DB search
MAGKRVGLALATEAILLVLVTSESFKVEITPGPRIAAQIGNVTVLTCIATGCAAPSFSWR
TQIDSPLGGEVEPGAKKSILTMNPVDFKNEHSYLCTAFCENKKMERAVQVELYSFPQDPV
ITMSDFLEVGKPATITCQVPQVYPSERLKIELLKDGHIIESKEFFMDEEKKSLETKSLEV
TITPTILDIGQSITCLAELPIDDMEFLPKLRKTTQKLPINTAPKNTVVSITPSNVVQAGD
YVKMTCSSEGLPAPEISWSKKRRDGNLEILSHNATLILNAAMTTDSGLYVCEGTNRVGKD
KKEVELIVQDESFKAEILERPKITAQIGNLTVLTCSVTGCPNPSFSWRTQTDSPLEGKVK
NEDTRSTLTMSPVGFKNEHSYLCTAFCGTRKMESDIQVELYSFPHDPVITMSDFLEVGKP
ATITCQVPQVYPSERLKIELLKDGYSIESKEFFMDEEKKSLETKSLEVTITPTTLDIGQS
ISCQAELPIDDMEFLPKLRLTTRRLNIGIAPRNTVISGAPTTTVQEGDYVTVSCSSEGLP
APEISWSKRLDNGDLEFLSQNATLTFNATVTENSGIYVCEGSNQAGKERKEVELIVQVPP
KDTVLVAFPSNSVKEGDTVTISCTSVGVSPSQIVLRKKADPGEQVLESRNGHYTIHAARL
EDAGIYECESKTEVGRQLRSLNLDVKVPPRNTTILIHPSRNVNEGENVTITCKTFSHPPA
VIVLKKVDLANEVSICSKNGTFTLYHVTPNDTGVYVISVSNEVGKDSEQIEISVKRRENH
IDYFSPELVALYCVASLIIPSVGMIIFLVRKANVKGSYSLVDALKSKV
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggctgggaaaagggtcggactcgccctagccacagaagcgattttgctggtgttggtg
acttctgaaagttttaaggtggaaatcactccaggacccagaatcgccgctcagattggc
aatgtaaccgtgttgacctgcatcgctactgggtgtgcggctccatcgttctcttggaga
acccagatagacagtcctcttgggggggaagtagaaccaggagcaaagaagtccatcttg
accatgaaccccgtggacttcaagaatgaacactcttacttgtgtaccgccttttgtgag
aataagaaaatggagagggccgtccaggtggagctttactcttttccccaagatccagtg
attacaatgagtgactttctggaggtggggaagcctgccaccatcacctgccaagtcccc
caggtttatccatcagagcgcttgaagattgaactcctgaaagatgggcacatcattgag
agcaaagagtttttcatggatgaggagaagaaatctctggagaccaagagcttggaggtg
accattacccccaccattcttgacattgggcaatccatcacttgtctggctgaattgcca
attgatgacatggagtttcttcccaagctgaggaaaaccacacagaagctccccattaat
actgcaccaaagaatacagtcgtctccatcaccccctccaatgttgtgcaggcaggtgac
tatgtgaagatgacatgttccagtgaaggccttcccgctccagagatttcttggagtaag
aaaaggagggatgggaatctggaaattctttcccacaatgcaactctcattctaaatgcc
gcgatgacaacagattctggactgtatgtgtgtgaaggaactaatcgggttggcaaagat
aaaaaagaagtggaactgattgttcaagatgaaagcttcaaagctgagatcttagaaaga
cccaaaatcactgcccagattggcaacttgaccgtgttgacctgtagtgttaccggatgc
ccgaacccatctttttcttggagaacccagactgacagtcctctcgaagggaaagtaaag
aacgaagacaccaggtctaccttgaccatgagccctgttggcttcaagaatgaacactct
tacctgtgtactgccttttgtggaactaggaaaatggagagtgacattcaagtggaactt
tactctttcccccatgatccagtgattacaatgagtgattttctggaggtggggaagcct
gccaccatcacctgccaagtcccccaggtgtatccatcggagcgcttgaagatcgaactc
ctgaaagatgggtacagcattgagagcaaagagtttttcatggacgaggagaagaaatct
ctggagaccaagagcttggaggtgaccattacccccaccactcttgacattgggcaatcc
atcagttgtcaggctgaactgccgattgatgacatggagtttcttcccaagctaaggcta
accacacggaggttgaatattggcatcgcaccaaggaatacagtcatctctggcgctccc
accactactgtgcaggaaggtgattatgtgacagtgtcatgttccagtgaaggtcttccg
gctccagagatttcttggagtaaaagactggataatggggatctggaatttctttcccag
aatgcaactctcactttcaatgccacagtgacagaaaattctggaatttatgtgtgtgaa
ggaagtaaccaggctggcaaagaaagaaaagaggtggagttaattgttcaagttccacca
aaagacacagtgcttgtagctttcccttccaacagtgttaaagaaggagacactgtaact
atctcttgcacatccgtgggtgtttctcccagtcaaattgtcttaaggaagaaagctgat
ccgggagagcaagtactggaatccagaaatggtcattatactatacatgctgctcggtta
gaggatgcaggaatttatgaatgtgaatccaaaactgaggttggacggcaattgagaagc
ctaaatcttgatgttaaagtaccacctcgaaacacaacaatattgattcacccatctaga
aatgtaaatgaaggggaaaatgtcaccattacatgtaaaacatttagccatccgcctgca
gtgattgtcctgaaaaaggttgatctggccaacgaagtatccatatgttcaaagaatgga
acctttactttgtatcatgtcaccccaaatgacaccggggtatatgtgattagtgtttcc
aatgaggttggaaaagactcggaacagattgaaatctcagttaagagaagggaaaaccac
atagactacttttctcctgaacttgttgcactctactgcgtcgcctccctcatcatccca
agcgtcggaatgatcattttcctcgtgaggaaagccaacgtcaagggttcctacagcctg
gtagatgcactcaaatccaaagtgtag
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