Tachyglossus aculeatus (Australian echidna): 119929671
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Entry
119929671 CDS
T10703
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu04151
PI3K-Akt signaling pathway
tacu04382
Cornified envelope formation
tacu04510
Focal adhesion
tacu04512
ECM-receptor interaction
tacu04518
Integrin signaling
tacu04820
Cytoskeleton in muscle cells
tacu04926
Relaxin signaling pathway
tacu04933
AGE-RAGE signaling pathway in diabetic complications
tacu04974
Protein digestion and absorption
tacu05146
Amoebiasis
tacu05165
Human papillomavirus infection
tacu05200
Pathways in cancer
tacu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
119929671 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119929671 (COL4A5)
04518 Integrin signaling
119929671 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119929671 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119929671 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
119929671 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
119929671 (COL4A5)
09158 Development and regeneration
04382 Cornified envelope formation
119929671 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
119929671 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
119929671 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
119929671 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
119929671 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
119929671 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tacu04147
]
119929671 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
tacu00536
]
119929671 (COL4A5)
Exosome [BR:
tacu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
119929671 (COL4A5)
Glycosaminoglycan binding proteins [BR:
tacu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119929671 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
119929671
NCBI-ProteinID:
XP_038603796
LinkDB
All DBs
Position
6:complement(15741388..15867351)
Genome browser
AA seq
1693 aa
AA seq
DB search
MQLNSRSQLGHLAAGLVALALCGQMAEAAACHGCSSGSKCDCSGVKGEKGERGFPGLEGH
TGLPGFPGPEGPPGPRGQKGDDGLPGPLGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGP
QGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGLPGMKGDPGSIITSSLPGPKGDPGYPGL
PGIQGPPGPSGIPGPLGPPGPPGLTGPPGAPGIPGPKGNMGLNFQGPKGEKGEQGLQGPP
GPPGQIGEQKRPIDLEFQKGDQGLPGERGPPGQPGPPGPPGSPGGVKGDKGEQGEPGKRG
KPGKDGESGLTGPQGFPGERGYPGVPGRNGEKGQKGDIGPVGPPGLVIPKPGTGGFVGEK
GNIGLPGLPGEKGERGFPGVPGPPGVPGPAGTPIPGLPGEPGFPGEMGQKGERGPPGLSL
PGLPGHDGQPGAPGPPGPPGPSGPRIPPSEQLCEPGDPGLPGLPGERGFPGEQGFKGDKG
DTCFNCIGNGVSGPPGQPGPPGPPGLPGSLGFPGQKGEKGHTGMPGLMGLPGSPGVPGAP
GFPGAKGDPGDILAFPGTKGDKGDPGFPGTPGLPGLAGSPGQDGLPGLPGPKGEPGGIAF
KGERGLPGNPGAPGLPGNRGPVGPPGFGPPGPIGEKGIQGVSGHPGPPGVPGAKGEPGQT
ISQPGQPGPPGSPGRAGEVGLPGDPGQPGHPGLRGIPGIKGEPGIPGIGLPGPPGPKGFP
GIPGSPGEPGAPGRMGPEGPPGQPGFTGQKGEAGFGQPGLPGTPGTPGSKGQPGPKGDSG
FPGPRGLPGRDGFDGTPGPKGDPGASGLPGPPGPQGLPGIGGQGPPGQPGLPGAVGPPGL
SGLPGEKGAPGRPGLDVPGPPGERGSSGFPGSPGPLGPPGPPGQPGREGVPGFPGAKGEM
GVMGPPGPPGPLGIPGRSGVPGLKGDSGRPGQPGIPGPAGQKGGKGEPGLPGPPGRMDPN
FLGSKGEKGDPGLPGIPGELGQKGYQGIPGDPGQPGLIGQPGSPGPSGPKGDPGLPGQPG
LTGPPGIKGSIGDMGFPGPQGVKGTPGSPGVPGQPGSPGFPGIKGDKGDPGIGGVGFPGP
PGPKGDSGLPGLPGAPGTKGAIGNPGLPGLPGSPGPKGQTGLPGFPGSRGLPGSKGFDGL
PGSPGLPGEPGPVGGQGRPGPPGIPGEKGKPGQDGIPGPAGQKGEPGQPGFGRPGPPGLP
GLSGQKGDTGSPGSPGSPGLPGPKGEPGFQGFPGVQGPPGLPGSPGQSQEGPKGSTGPQG
PPGRPGPAGPPGPPGREGPRGPPGNGQQKGERGNPGQPGQPGLPGLKGDQGPAGLPGNPG
RPGLNGMKGDLGLPGVPGFPGMKGPSGPPGSTGPAGDPGLTGPPGPPGLPGHSGETIVVK
GDPGPPGSPGLPGLKGLPGLPGPQGIPGPTGQPGDPGRNGLPGFDGPGGRKGDRGHPGQP
GNRGSDGPPGPDGLQGPPGPPGAPSMAHGFLITRHSQTTDTPPCPQGTVPIYDGFSLLYV
QGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPL
KGPSIQPFISRCVVCESPAMVIAIHSQTIQIPHCPQGWDSLWIGYSFMMHTSAGAEGSGQ
ALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVDVAEMFSKPQSETLKAGDLR
TRISRCQVCKKRT
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgaactccaggagccagcttggccacctggctgccggcttggtggccctggcg
ctctgcgggcagatggccgaggctgcggcttgccatggctgttcgtcgggctctaaatgt
gactgcagtggagttaaaggggaaaagggggagcgaggatttccaggtctagaaggacat
acaggtttacccgggtttccgggaccagaaggaccccctgggcctagaggccaaaagggt
gatgatggacttccagggcctctgggacccaaagggatcaggggaccccctggacttcct
ggattccccggaacaccgggacttcctggtatgcctggccatgacggagccccaggacct
caagggatcccggggtgcaacggaaccaagggagaacgtggattcccaggaagccctggt
tttcctggcttacagggccctccgggacctcctggcctcccagggatgaagggggacccg
ggtagcatcatcacatcgtcgctgccggggccaaagggtgatcctgggtatccaggcctc
cctggaatacagggtccccctggcccatcaggcatcccgggtccactgggacctccagga
ccaccaggtctaacgggtcctccaggtgcaccaggaattccaggaccaaagggcaatatg
ggtttaaatttccaaggacccaaaggtgaaaagggtgagcaaggtcttcaggggccacct
ggtccacctgggcagattggtgaacagaagagacctattgatttagagtttcagaaagga
gatcagggtcttcctggagaacggggaccccccggacaaccaggaccacccgggcctcct
ggttctccaggtggtgtgaaaggggacaaaggtgagcaaggagaaccaggaaaaagagga
aaaccaggtaaagatggagaaagtggcctaacgggcccacagggcttccctggtgagcgt
ggttaccctggagttcctggaaggaatggcgaaaagggtcagaaaggagacatcgggcca
gttggacctccaggactggtgatccctaaacccgggaccggcggattcgtgggagaaaag
ggaaatataggtttgccgggcttgccgggagagaaaggagagcgaggatttcctggggtt
ccagggcctcctggagttcctggtccagcgggaactcccattccgggcctacctggggaa
cctggctttccaggggaaatgggccagaagggggagagaggccccccaggactttccctc
cccggactcccgggacacgatggccaacctggtgctcccgggcccccagggccgcctgga
ccatccggaccccgcattcctccaagtgaacaactgtgtgagccgggagaccccggcctc
cccggacttccaggagagagaggtttccctggagagcaaggatttaaaggggacaaggga
gacacttgcttcaactgtattggaaatggcgtttcgggacccccgggacagccaggacca
ccaggacctcctgggcttccaggatctcttggtttccctggacagaaaggcgagaaaggg
cacactggtatgcctggactcatgggattgcctggcagtccaggagttcccggtgcccca
ggctttcccggtgccaaaggtgacccaggggacatcctcgcctttccaggaaccaagggt
gacaaaggagacccaggttttcctgggacaccgggccttcccggtttggctgggagccct
ggacaggatgggctgcccggtctccctggccccaagggtgaacctggtggcatcgctttc
aaaggagaaagggggctccctgggaacccaggcgctcccggcctccctgggaacaggggg
ccagtgggaccccctggctttggccccccaggtcccatcggggagaaaggtatccaaggg
gtgtcaggccatccaggacctccaggtgtgccaggagccaaaggtgaaccggggcagacg
ataagtcagccgggccaacctggtcctcccggcagcccaggcagggctggggaagtggga
cttccaggcgaccctggccagccaggacatccgggcttgcgtggcatccctggcatcaag
ggggaaccgggtatccctggcattgggcttccaggaccgccagggcccaaaggtttccct
ggaattccggggtctcctggagaaccaggagcaccaggaagaatgggtccggaaggtcct
cctgggcaacctggatttacgggacagaagggagaggctggatttggacaacccgggcta
cctggaacgccaggaacccctgggtcgaaaggacagcctgggcccaaaggcgattctggg
ttccccggaccccgcggtctcccaggacgtgatggctttgatgggactccaggacccaaa
ggtgaccccggagcaagtggactacctggaccaccaggccctcaagggctacctggaatt
ggcggccaaggacccccaggacagcccggcctccctggggctgtggggcccccaggtttg
tcgggactccccggagagaaaggagccccgggccgccccggtttggatgtccctggaccc
cctggggagagaggcagctcaggattccccggttcgcccggccccttggggccacctgga
ccgccgggacagccaggacgagagggtgtcccaggatttccaggtgccaaaggtgaaatg
ggagtaatggggcctccaggcccaccgggacctttaggaattcctggaaggagtggagtt
cctggccttaaaggtgacagtggccgtccgggtcagccggggatccccggacccgcgggg
cagaagggtggcaaaggagaaccaggcctcccaggccctcccggcagaatggatccaaat
tttctgggctccaaaggagagaagggcgatcccggcttaccaggtatcccaggagagttg
ggccagaagggctaccaaggaattcccggtgacccaggacaaccaggtctgattggacaa
cctggctcaccgggtccatcaggacccaagggagaccctggccttcccggccaaccggga
ctcacaggacctcccggaataaaaggcagcatcggtgacatgggtttcccaggtccccaa
ggggtgaaagggactcctggctccccaggagttcccggacagcccggttcccctggattc
cctggcataaaaggggacaaaggtgacccgggtatcggaggggttggcttccctgggccc
cctggccctaagggtgactccggattgcctgggttgccaggagcacctggtaccaaaggt
gccataggaaaccctggtttgcctgggttaccagggagtcctgggcccaaaggacaaacc
ggccttcccggattcccaggttcccgaggcctgccgggatccaagggcttcgacggtcta
cctggaagccctggcctcccaggagaacctggtcctgtaggtggacagggccgccccggc
ccacctgggatccctggtgagaaggggaaacctggtcaagatggcatccccggaccagct
ggacagaagggtgaaccaggtcaaccaggtttcggccgcccgggccccccgggtctccct
ggactttctgggcagaagggggacacgggctctcctggctctccgggaagccccggcctt
ccgggaccaaagggcgaacctggtttccagggattccctggggttcagggtcccccaggc
cttcccggttccccgggccaatctcaagaaggccctaaaggtagcaccggcccacaaggc
cctcccgggagaccaggtcctgcaggtcctccagggcccccaggtcgagaaggtccccgg
ggtccccctggaaatggacagcagaaaggagagagggggaatcccggtcaacccggacag
cctggcttacctggcttgaaaggagatcaaggaccagccggcctcccggggaatccagga
cggccaggcctcaatggaatgaaaggcgatctcgggctccctggtgttcccggattccca
gggatgaaaggccccagtggacccccaggctcaactggtcctgctggagacccagggcta
acaggcccaccaggtcctccaggcctccccggtcactcgggagaaaccatcgtggtcaaa
ggagatcccggccccccggggtcaccgggtctgccgggactgaaagggctaccgggcctt
ccaggaccccaagggataccaggtccaactggtcagcctggggatcccggccgcaatggg
cttcctggatttgacggccctggtgggcgcaagggagacagaggccacccgggccagcca
ggcaaccggggatccgacggcccccccgggcccgatgggttgcaaggtccccctggccct
ccaggagcaccatctatggcccacggattcctcatcactcgccacagccagaccacagat
acgcccccctgcccacaaggcaccgttccaatctatgatggcttttccctcctctacgtg
cagggcaacgagagagcccacggccaagacttggggacggccggaagctgtttgcgccgc
ttcagcaccatgcccttcatgttctgcaacatcaacaacgtgtgcaacttcgcctcacgg
aacgactactcctactggctgtccactcccgagcccatgcccatgagcatggagcccctc
aaggggccgagcatccagccgttcatcagccggtgtgtagtgtgcgaatctcccgccatg
gtcatcgcgatccacagccagaccatccagatcccgcactgtccccagggctgggattcc
ctgtggattggctattcctttatgatgcacaccagtgccggcgctgagggctcgggccag
gccctggcctcgcccggctcctgcctcgaggaattccgctcggctcctttcatcgagtgc
cacggccggggcacctgcaactactacgccaactcgtacagcttctggctggccaccgtg
gacgtggcggaaatgtttagtaaacctcagtcagagacgctgaaagcgggagacctcagg
acccgtattagccgatgtcaggtgtgcaagaagaggacgtaa
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integrated database retrieval system
