Tachyglossus aculeatus (Australian echidna): 119930042
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Entry
119930042 CDS
T10703
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03013
Nucleocytoplasmic transport
tacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119930042 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
119930042 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tacu03019
]
119930042 (THOC2)
03041 Spliceosome [BR:
tacu03041
]
119930042 (THOC2)
Messenger RNA biogenesis [BR:
tacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
119930042 (THOC2)
Spliceosome [BR:
tacu03041
]
Complex C
Other components
EJC/TREX
119930042 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119930042 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
119930042
NCBI-ProteinID:
XP_038604396
LinkDB
All DBs
Position
6:19943983..20027032
Genome browser
AA seq
1623 aa
AA seq
DB search
MAAAAAPPPPPPPPAASAVPTEWIKNWEKSGKSEFLQLCRTLSENKSHENMTFGEIQQAL
YELAYHVIKGNLKHDQASNVLSDIIEFRDDMPSILADVFCILDIETSCLEEKSKRDQFTQ
LVLACLYLVSDTVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREEN
EGYAKLIAELGQDLSGNVTSDLILENIKSLIGCFNLDPNRVLDVILEVYECRPEYDEFFV
PLIESYMYMCEPQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQHHLIDLEDLYVHLL
PVDNAILEEHKREIVEAKQIVRKLTMVVLSSEKTEEKDKEKEKEEEKTEKPPDNQKLGLL
EALLKIGDWHHAQSIMDQMPPFYATSHKPIAIALCQLIHVTVEPLYRRVGVPKGAKGSPV
ASLQNKRAPKQAENFEDLRKEVFNMLCHLGPHLSHDPILFAKVVRLGKSFMKEVGAAKKH
VSDDRMVQFQSDGSKQEDKEKMEILFSCLLSITDQVLLPSLTLMDCNACMSEELWGMFKT
FPYQYRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHS
NPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTT
ISSWLQSLASFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEE
MTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVI
FQEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAA
FFLSRPMYAHHISSKYDELKKAEKGSKQQHKVHKYITSCELVMAPVHEAVISLHLPKVWD
DISPQFYATFWSLTMYDLAVPHNSYEREVNKLKIQMKAIDDNQEMPPNKKKKEKERCTAL
QDKLLEEEKKQMEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAV
YCARFVELVHQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWH
SDRTIYEKECGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLET
GEYTHIRNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLK
SRKPYMVPENEFHHKDPPPRNAVAATVQNGPGGVGLPASLTINAAKLEESTAEETDKLKE
KSQGAIKVVNKAASATPKVTTSNGNSASNSKVIKENDKEKSGKEKEKEKKEKTPAGTPEA
KALGKDGKEKPKEERANKDEKARDTKEKTPKSDKEKEKIKKDEKSSKDEKSKTIPANPES
KSAVEKEKEKEPSRERDVTKEAKSKENIKGGEKIAVAGSLKSPVPRSEASESEREQKRRK
LDTHSSPSHSSTVKDNNLSELKEPSAKHYINHTTPILSKSKEREVDKKDLDKSRERSRER
EKKDEKDRKERKRDHSNSDREVPQDSTKRRKEENGTTGASKHSKSESPSDSPRSNEKEKD
KNKSKSSGKEKSDSIKTEKMEKSSSGSKKESRHDKEKTEKKEKRDSAGGKEEKKHHKSSD
KHR
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcgcctcctccaccaccacctcctcctgcggcctcggccgtccct
accgagtggatcaagaactgggagaaatcagggaaaagcgaatttttgcaattatgccgc
actctcagtgagaataaaagccatgaaaatatgacttttggagaaatccagcaagctctc
tatgaacttgcatatcatgtcatcaaaggaaatctaaagcatgaccaagcttctaatgtc
ctcagtgacattattgaatttcgtgatgacatgccctccattttagctgatgtattctgc
atattagatatagaaacgagttgtttagaagaaaaaagcaagagagatcaattcacgcag
ttggtgttagcatgtttgtacttagtttcagacacagttctaaaggagcgactggatcca
gaaacattggagtcattagggcttatcaagcaatcccagcaattcaatcaaaaatctgta
aaaatcaagacaaaacttttttataaacagcagaaattcaatttgttaagggaagagaat
gaaggttatgcaaagctgattgctgaactggggcaagatttatctggaaatgttactagt
gatttaatcttggaaaatataaagtctttaataggatgctttaatctggaccccaacaga
gttttggatgtcattttagaagtctatgaatgccggccagaatatgatgaattctttgta
cctttaatagaatcctacatgtatatgtgtgaacctcaaacactgtgtcatatacttggg
ttcaaatttaagttttaccaggaaccaaatggagagaccccatcatctttgtacagagtt
gctgctgtactcctacaacatcatcttatagatttagaagatctttatgtacaccttctt
ccagtggataatgccattcttgaagaacacaaacgagagattgtagaagctaaacaaatt
gttcggaaacttaccatggtggtattgtcttctgaaaagactgaagagaaagacaaagag
aaagagaaagaagaggagaagacagaaaagccacctgataaccagaaacttggtttactg
gaagctctgcttaagattggtgattggcatcatgcccagagcattatggatcagatgcct
ccattttatgccacttcacacaagccaatagctattgctctctgccagcttatacatgta
actgttgaacctctctaccgaagagttggagtaccaaagggtgctaaaggatcacctgtc
gcttctttacaaaacaaaagagctccaaagcaagcagagaattttgaagatttgcggaaa
gaagtgttcaatatgctttgtcaccttggccctcacctgtctcatgatcccattttattt
gcaaaagtcgtgcgcttggggaaatcatttatgaaagaggttggagcggcgaagaaacat
gtcagcgatgacagaatggttcagtttcagtccgatgggagcaagcaagaagataaagag
aaaatggaaattttgtttagttgtttgcttagtattactgaccaggtgctacttccgtct
cttactttgatggactgcaatgcttgtatgtctgaggaactctggggcatgtttaagacg
tttccatatcagtataggtatcgtctatatggccagtggaaaaatgaaacctacaatagc
cacccactgcttgtaaaagttaaagctcagacaatagacagagccaaatatataatgaag
cgcctgactaaggaaaatgtgaaaccttctggaagacaaattggaaagttgagccacagt
aatccaaccattttatttgattatattttatcccagatacaaaaatatgataacctaatt
acaccagtagtagattctttgaaatacctcacttcattgaactatgatgtcctggcttat
tgcattattgaagctcttgctaatccagagaaagagagaatgaaacatgatgacacaact
atctcaagttggcttcaaagtttagctagtttctgtggtgcagtgtttcgtaaatatcca
attgagcttgccggtcttcttcagtatgtggcaaatcaactaaaagccggaaaaagcttc
gatctgcttattctgaaggaggtggtccaaaaaatggctggcattgagattacagaagaa
atgacaatggagcaactagaagccatgactggtggggaacagttaaaagccgagggtggc
tactttggacaaattcggaacactaagaagtcctcccagagattaaaagatgcattgctg
gatcatgaccttgcccttcctttgtgtttgcttatggctcagcagaggaatggggttatc
tttcaggaaggaggggagaaacacttgaagttagtgggaaagctttatgaccagtgtcat
gatactctggtgcagtttggtgggtttttagcatccaatctcagcacagaagattacata
aagcgagtgccttcgattgatgtactgtgtaatgagtttcacacaccccatgatgctgca
tttttcctgtcacggcctatgtacgcacaccatatttcatcaaaatacgatgaactgaaa
aaagctgaaaagggaagcaagcagcagcataaagttcataaatacatcacgtcatgtgag
cttgtgatggctcctgtccatgaagcggtgatctctttgcaccttcctaaagtttgggat
gacatcagtcctcagttctacgctacgttctggtcattaacaatgtatgaccttgcagtg
ccccataatagttatgaaagagaggtcaataagctcaaaatccagatgaaagctatcgat
gacaatcaggaaatgcctccaaataaaaagaaaaaagagaaggagcgttgtactgccctt
caggacaagcttcttgaagaagaaaagaagcaaatggagcatgtacaaagggttttgcag
aggttaaaactggaaaaggataactggcttttagcaaagtctacaaaaaatgagaccatc
acaaaatttctacagttgtgtatatttccgcgttgcattttttcagcaattgatgctgtt
tactgtgctcgctttgtagaattggtgcatcaacagaaaacccctaacttttccacactt
ctgtgttatgatcgagttttctctgatataatttacacagttgcaagctgtaccgaaaat
gaagctagtcgatatggcaggtttttgtgctgtatgttagagactgtgactaggtggcat
agtgataggacgatatatgaaaaggaatgtggaaactatccaggtttcttaaccatatta
cgagcaactggatttgatggaggaaacaaagctgatcaattagactatgaaaattttcga
cacgttgttcacaagtggcactataaactcaccaaggcatctgtacactgccttgaaact
ggtgaatacacccacatcagaaatatcctgatagtgctgactaaaatccttccttggtat
ccaaaagttttgaatctgggacaggctttggaaagaagagtacacaaaatttgccaagaa
gaaaaggagaagaggcctgatctatatgcattggccatgggctactctgggcagttgaaa
agtagaaagccgtacatggtacctgaaaatgagttccaccacaaagaccctcctccaagg
aatgcggttgctgccaccgtacaaaatggaccaggtggtgttgggctgccggcatcactc
actataaatgcagctaaactggaagaaagcactgctgaggagaccgataaattgaaggag
aaatctcagggtgctataaaagttgttaataaagctgccagtgcaaccccaaaagtgact
actagcaatggaaacagtgcttctaacagcaaagttatcaaagaaaatgacaaagaaaaa
agtgggaaagaaaaagagaaagagaaaaaagaaaagactccagctggcactccagaggcc
aaggcacttggtaaagatggtaaagaaaaaccaaaggaagagcgggcgaacaaagatgaa
aaagcaagagacaccaaggaaaaaaccccaaagtctgacaaggagaaggaaaaaataaag
aaggacgaaaaaagttctaaagatgaaaaatccaagaccattcctgccaaccctgaatcc
aaatcagctgtagaaaaggagaaagagaaggaaccatccagagaaagagatgtaacaaag
gaagcaaaatccaaggaaaacataaaaggaggagaaaagatagcagttgctgggtccttg
aagtcacctgttccccggtcagaagcatcagagtctgaaagggaacagaaacgccgcaaa
cttgatacccactcttctccgtcacattcctcaacagtaaaggacaacaacctcagcgaa
ctcaaggagccttcagcaaagcactacattaaccacactactccaatactgtccaagagt
aaggagagagaagtggacaagaaagatttggacaagtcaagggaaagatccagagaaaga
gaaaagaaagatgaaaaggacaggaaagaacggaaaagggatcattcaaacagtgaccgt
gaggtgccacaggactctacaaagaggcgtaaagaggaaaacggaacaactggtgcttcc
aaacacagtaaaagtgaaagtccatctgattcccctcgttcaaatgagaaggaaaaagat
aaaaataagtcaaagtcttcggggaaagagaaaagcgattcaatcaaaacagaaaagatg
gagaaaagttcttctggtagcaaaaaggaatcgaggcatgataaagaaaaaacagagaaa
aaggagaaacgggacagtgctggagggaaggaagaaaagaaacatcataagtcttcagac
aagcatagataa
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integrated database retrieval system
